RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FANCBQ8NB91 859 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 RBM46Q8TBY0 533 aaKnown RBP16.78■□□□□ 0.28
COL6A1-202ENST00000463060 MYL10Q9BUA6 226 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 GBA2Q9HCG7 927 aaPredicted RBP16.78■□□□□ 0.28
COL6A1-202ENST00000463060 TRPM7Q96QT4 1865 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 GOLGA8BA8MQT2 603 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 CELF2O95319 508 aaKnown RBP16.77■□□□□ 0.28
COL6A1-202ENST00000463060 CALM1P0DP23 149 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 CALM2P0DP24 149 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 CALM3P0DP25 149 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 CDC27P30260 824 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 ECE1P42892 770 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 LRRC47Q8N1G4 583 aaKnown RBP16.77■□□□□ 0.28
COL6A1-202ENST00000463060 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 GMCL1P1Q8NEA9 526 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 CLMNQ96JQ2 1002 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 KIAA1683Q9H0B3 1180 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.28
COL6A1-202ENST00000463060 AFG3L2Q9Y4W6 797 aa16.77■□□□□ 0.28
COL6A1-202ENST00000463060 PALM3A6NDB9 673 aaPredicted RBP16.76■□□□□ 0.27
COL6A1-202ENST00000463060 F5H6K3 240 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 CTDNEP1O95476 244 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 RXRAP19793 462 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 ADD1P35611 737 aaKnown RBP16.76■□□□□ 0.27
COL6A1-202ENST00000463060 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
COL6A1-202ENST00000463060 KLRC3Q07444 240 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 STK3Q13188 491 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 GRM4Q14833 912 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 NTRK3Q16288 839 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 KIAA1755Q5JYT7 1200 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
COL6A1-202ENST00000463060 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
COL6A1-202ENST00000463060 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
COL6A1-202ENST00000463060 ARHGEF10LQ9HCE6 1279 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 PICK1Q9NRD5 415 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 CSADQ9Y600 493 aa16.76■□□□□ 0.27
COL6A1-202ENST00000463060 SPDYE5A6NIY4 337 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 GOLGA8AA7E2F4 631 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 PDHBP11177 359 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 SLC4A3P48751 1232 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL6A1-202ENST00000463060 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 FUT2Q10981 343 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 C2orf69Q8N8R5 385 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 ZNF408Q9H9D4 720 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
COL6A1-202ENST00000463060 NDUFB10O96000 172 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 BACE1P56817 501 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 PPATQ06203 517 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 SPP2Q13103 211 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
COL6A1-202ENST00000463060 RTN1Q16799 776 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 STAG2Q8N3U4 1231 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 SMARCC2Q8TAQ2 1214 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
COL6A1-202ENST00000463060 VCPKMTQ9H867 229 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 EMILIN3Q9NT22 766 aa16.74■□□□□ 0.27
COL6A1-202ENST00000463060 USP17L10C9JJH3 530 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 IFNAR1P17181 557 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 FSTL1Q12841 308 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 SH3D19Q5HYK7 790 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 SLFN13Q68D06 897 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 USP17L2Q6R6M4 530 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
COL6A1-202ENST00000463060 NUP133Q8WUM0 1156 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 DCAF4Q8WV16 495 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 C12orf42Q96LP6 360 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 SH2D4AQ9H788 454 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 ELP3Q9H9T3 547 aa16.73■□□□□ 0.27
COL6A1-202ENST00000463060 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
COL6A1-202ENST00000463060 CCDC196A0A1B0GTZ2 297 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 C19orf81C9J6K1 198 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 SMARCA1P28370 1054 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 KIF5BP33176 963 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 GJA5P36382 358 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
COL6A1-202ENST00000463060 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
COL6A1-202ENST00000463060 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
COL6A1-202ENST00000463060 KCNH4Q9UQ05 1017 aa16.72■□□□□ 0.27
COL6A1-202ENST00000463060 KLRF2D3W0D1 207 aa16.71■□□□□ 0.27
COL6A1-202ENST00000463060 CXCL11O14625 94 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms