RNA–Protein interactions for RNA: ENST00000462163.1

RPN2-207, Transcript of ribophorin II, humanhuman

TSL 3

Gene RPN2, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-207ENST00000462163 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
RPN2-207ENST00000462163 TCP11L1Q9NUJ3 509 aa11.21□□□□□ -0.61
RPN2-207ENST00000462163 TMOD4Q9NZQ9 345 aa11.21□□□□□ -0.61
RPN2-207ENST00000462163 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
RPN2-207ENST00000462163 AGTPBP1Q9UPW5 1226 aa11.21□□□□□ -0.61
RPN2-207ENST00000462163 BTBD19C9JJ37 291 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 PRC1O43663 620 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 NDUFB10O96000 172 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 TOP1P11387 765 aaKnown RBP11.2□□□□□ -0.62
RPN2-207ENST00000462163 CPA1P15085 419 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 MCM5P33992 734 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 TM4SF4P48230 202 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 SEC23AQ15436 765 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 FASTKD5Q7L8L6 764 aaKnown RBP11.2□□□□□ -0.62
RPN2-207ENST00000462163 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 IFNL1Q8IU54 200 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
RPN2-207ENST00000462163 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 JMYQ8N9B5 988 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 GOPCQ9HD26 462 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 COL11A1P12107 1806 aaPredicted RBP11.2□□□□□ -0.62
RPN2-207ENST00000462163 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
RPN2-207ENST00000462163 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
RPN2-207ENST00000462163 RAD21O60216 631 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 INHBEP58166 350 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 LPAR1Q92633 364 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 MKL1Q969V6 931 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 TCEANC2Q96MN5 208 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
RPN2-207ENST00000462163 LRRC2Q9BYS8 371 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 RPAP3Q9H6T3 665 aaPredicted RBP11.19□□□□□ -0.62
RPN2-207ENST00000462163 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
RPN2-207ENST00000462163 ZSWIM8A7E2V4 1837 aa11.19□□□□□ -0.62
RPN2-207ENST00000462163 WDR19Q8NEZ3 1342 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 F5H6K3 240 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 PDHXO00330 501 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 SH2B2O14492 632 aaPredicted RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 ANAPC15P60006 121 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 MAP2K1Q02750 393 aaPredicted RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 KLRC3Q07444 240 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 TMEM67Q5HYA8 995 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 IFIT1BQ5T764 474 aaKnown RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 SLFN13Q68D06 897 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 BLOC1S2Q6QNY1 142 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 ANKS1AQ92625 1134 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 TTC14Q96N46 770 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 BACH2Q9BYV9 841 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 UPF3BQ9BZI7 483 aaKnown RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 TANGO6Q9C0B7 1094 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 LY9Q9HBG7 655 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
RPN2-207ENST00000462163 MTMR7Q9Y216 660 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
RPN2-207ENST00000462163 ADGRA2Q96PE1 1338 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 ERICH2A1L162 156 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
RPN2-207ENST00000462163 CYP2C8P10632 490 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 RPS6KB1P23443 525 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 EXOSC10Q01780 885 aaKnown RBP11.17□□□□□ -0.62
RPN2-207ENST00000462163 PABPC4Q13310 644 aaKnown RBP eCLIP11.17□□□□□ -0.62
RPN2-207ENST00000462163 CRHR2Q13324 411 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 WTAPQ15007 396 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 TAF1CQ15572 869 aaPredicted RBP11.17□□□□□ -0.62
RPN2-207ENST00000462163 FAM83BQ5T0W9 1011 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 DHX32Q7L7V1 743 aaKnown RBP11.17□□□□□ -0.62
RPN2-207ENST00000462163 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 GMCL1Q96IK5 515 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 PARK7Q99497 189 aaKnown RBP11.17□□□□□ -0.62
RPN2-207ENST00000462163 MTA3Q9BTC8 594 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 C22orf23Q9BZE7 217 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 ASCC2Q9H1I8 757 aaPredicted RBP11.17□□□□□ -0.62
RPN2-207ENST00000462163 KAT14Q9H8E8 782 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 RNF186Q9NXI6 227 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 PNMA3Q9UL41 463 aa11.17□□□□□ -0.62
RPN2-207ENST00000462163 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L19D6RCP7 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 USP17L20D6RJB6 530 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 TRPA1O75762 1119 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 ALDH1A1P00352 501 aa11.16□□□□□ -0.62
RPN2-207ENST00000462163 PDHBP11177 359 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms