RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TDO2P48775 406 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 SMC5Q8IY18 1101 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 NKX2-3Q8TAU0 364 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 SOCS4Q8WXH5 440 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 LPAR1Q92633 364 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 TANGO6Q9C0B7 1094 aa22.64■■□□□ 1.21
COL5A1-203ENST00000460264 PATL2C9JE40 543 aaKnown RBP22.63■■□□□ 1.21
COL5A1-203ENST00000460264 HMGCRP04035 888 aa22.63■■□□□ 1.21
COL5A1-203ENST00000460264 APPP05067 770 aa22.63■■□□□ 1.21
COL5A1-203ENST00000460264 CCAR1Q8IX12 1150 aaKnown RBP22.63■■□□□ 1.21
COL5A1-203ENST00000460264 LNPKQ9C0E8 428 aa22.63■■□□□ 1.21
COL5A1-203ENST00000460264 RWDD1Q9H446 243 aaPredicted RBP22.63■■□□□ 1.21
COL5A1-203ENST00000460264 VCPKMTQ9H867 229 aa22.63■■□□□ 1.21
COL5A1-203ENST00000460264 KANSL2Q9H9L4 492 aa22.63■■□□□ 1.21
COL5A1-203ENST00000460264 MYH4Q9Y623 1939 aa22.63■■□□□ 1.21
COL5A1-203ENST00000460264 EEF2P13639 858 aaKnown RBP22.62■■□□□ 1.21
COL5A1-203ENST00000460264 RASA1P20936 1047 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 CCNA1P78396 465 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 GPR142Q7Z601 462 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 IFNL3Q8IZI9 196 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 SPICE1Q8N0Z3 855 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 NUDT12Q9BQG2 462 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.62■■□□□ 1.21
COL5A1-203ENST00000460264 BTBD7Q9P203 1132 aa22.62■■□□□ 1.21
COL5A1-203ENST00000460264 COL11A1P12107 1806 aaPredicted RBP22.61■■□□□ 1.21
COL5A1-203ENST00000460264 COG2Q14746 738 aa22.61■■□□□ 1.21
COL5A1-203ENST00000460264 PLEKHH3Q7Z736 793 aa22.61■■□□□ 1.21
COL5A1-203ENST00000460264 STK11IPQ8N1F8 1099 aa22.61■■□□□ 1.21
COL5A1-203ENST00000460264 U2AF1L4Q8WU68 220 aaKnown RBP22.61■■□□□ 1.21
COL5A1-203ENST00000460264 TRIB2Q92519 343 aa22.61■■□□□ 1.21
COL5A1-203ENST00000460264 USP6NLQ92738 828 aa22.61■■□□□ 1.21
COL5A1-203ENST00000460264 EVI5LQ96CN4 794 aa22.61■■□□□ 1.21
COL5A1-203ENST00000460264 PAK6Q9NQU5 681 aaPredicted RBP22.61■■□□□ 1.21
COL5A1-203ENST00000460264 ZNF236Q9UL36 1845 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 IGHDP01880 384 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 XRCC5P13010 732 aaKnown RBP22.6■■□□□ 1.21
COL5A1-203ENST00000460264 CYP2B6P20813 491 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 ATP2B2Q01814 1243 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 MORN1Q5T089 497 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 NACAP1Q9BZK3 213 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 MKNK2Q9HBH9 465 aa22.6■■□□□ 1.21
COL5A1-203ENST00000460264 WDR46O15213 610 aaKnown RBP22.59■■□□□ 1.21
COL5A1-203ENST00000460264 TRIM32Q13049 653 aa22.59■■□□□ 1.21
COL5A1-203ENST00000460264 CWC22Q9HCG8 908 aaKnown RBP22.59■■□□□ 1.21
COL5A1-203ENST00000460264 HOXC10Q9NYD6 342 aa22.59■■□□□ 1.21
COL5A1-203ENST00000460264 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
COL5A1-203ENST00000460264 FOXP2O15409 715 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 SGPL1O95470 568 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 B4GALNT3Q6L9W6 998 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 CCDC129Q6ZRS4 1044 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 UBE2Q1Q7Z7E8 422 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 DEFB118Q96PH6 123 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 APBA2Q99767 749 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.58■■□□□ 1.21
COL5A1-203ENST00000460264 NAPBQ9H115 298 aa22.58■■□□□ 1.21
COL5A1-203ENST00000460264 FLOT1O75955 427 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 DSG3P32926 999 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 RGS2P41220 211 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 NUCB1Q02818 461 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 WDR78Q5VTH9 848 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 ZNF287Q9HBT7 754 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 GOPCQ9HD26 462 aa22.57■■□□□ 1.2
COL5A1-203ENST00000460264 IGKV6D-41A0A0C4DH26 115 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 PRDM1O75626 825 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 MAP2K5Q13163 448 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 MAP3K21Q5TCX8 1036 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
COL5A1-203ENST00000460264 MB21D1Q8N884 522 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 ATG4CQ96DT6 458 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 MOV10L1Q9BXT6 1211 aaKnown RBP22.56■■□□□ 1.2
COL5A1-203ENST00000460264 NYAP2Q9P242 653 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 RPTORQ8N122 1335 aa22.56■■□□□ 1.2
COL5A1-203ENST00000460264 PLIN4Q96Q06 1357 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 SLC15A5A6NIM6 579 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 ZKSCAN1P17029 563 aaPredicted RBP22.55■■□□□ 1.2
COL5A1-203ENST00000460264 PTPREP23469 700 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 PPARAQ07869 468 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 TICAM2Q86XR7 235 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 SPATC1LQ9H0A9 340 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 CRISPLD2Q9H0B8 497 aa22.55■■□□□ 1.2
COL5A1-203ENST00000460264 CEP290O15078 2479 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 FARP2O94887 1054 aaPredicted RBP22.54■■□□□ 1.2
COL5A1-203ENST00000460264 GRB14Q14449 540 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 CCL14Q16627 93 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 ZNF444Q8N0Y2 327 aaPredicted RBP22.54■■□□□ 1.2
COL5A1-203ENST00000460264 FAM227BQ96M60 508 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 HMX1Q9NP08 348 aaPredicted RBP22.54■■□□□ 1.2
COL5A1-203ENST00000460264 HELLSQ9NRZ9 838 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 FBXO28Q9NVF7 368 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 IVNS1ABPQ9Y6Y0 642 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 FRMPD3Q5JV73 1810 aa22.54■■□□□ 1.2
COL5A1-203ENST00000460264 A0A0D9SFI3 127 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 RAD21O60216 631 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 SLC3A2P08195 630 aaKnown RBP22.53■■□□□ 1.2
COL5A1-203ENST00000460264 PRKAR2AP13861 404 aaKnown RBP22.53■■□□□ 1.2
COL5A1-203ENST00000460264 CAPN2P17655 700 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 PDE4BQ07343 736 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 FAM83BQ5T0W9 1011 aa22.53■■□□□ 1.2
COL5A1-203ENST00000460264 VPS53Q5VIR6 699 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms