RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 CERKLQ49MI3 558 aaPredicted RBP16.09■□□□□ 0.17
SNHG17-208ENST00000456953 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
SNHG17-208ENST00000456953 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
SNHG17-208ENST00000456953 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
SNHG17-208ENST00000456953 XIRP2A4UGR9 3374 aa16.09■□□□□ 0.17
SNHG17-208ENST00000456953 MYH1P12882 1939 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-208ENST00000456953 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-208ENST00000456953 COBLO75128 1261 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-208ENST00000456953 RAG1P15918 1043 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 ERCC3P19447 782 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNHG17-208ENST00000456953 FPGSQ05932 587 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 COG2Q14746 738 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 CCDC158Q5M9N0 1113 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 ABRAQ8N0Z2 381 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 SPATC1LQ9H0A9 340 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 ZNF576Q9H609 170 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 CABP5Q9NP86 173 aa16.08■□□□□ 0.16
SNHG17-208ENST00000456953 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
SNHG17-208ENST00000456953 PRAMEF19Q5SWL8 479 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 ATXN2LQ8WWM7 1075 aaKnown RBP16.07■□□□□ 0.16
SNHG17-208ENST00000456953 MROH8Q9H579 483 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 GPR108Q9NPR9 543 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 XPNPEP3Q9NQH7 507 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
SNHG17-208ENST00000456953 A0A0G2JMZ2 1700 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 PQBP1O60828 265 aaKnown RBP16.06■□□□□ 0.16
SNHG17-208ENST00000456953 RARBP10826 455 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 CYP7A1P22680 504 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 USP5P45974 858 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 RNF180Q86T96 592 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 TIFAQ96CG3 184 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 ZNF512BQ96KM6 892 aaPredicted RBP16.06■□□□□ 0.16
SNHG17-208ENST00000456953 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
SNHG17-208ENST00000456953 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
SNHG17-208ENST00000456953 SHMT1P34896 483 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 PLA2G5P39877 138 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 AKNAD1Q5T1N1 836 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 MAML3Q96JK9 1138 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 PIH1D3Q9NQM4 214 aaKnown RBP16.05■□□□□ 0.16
SNHG17-208ENST00000456953 TMEM39AQ9NV64 488 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 RAPGEFL1Q9UHV5 662 aa16.05■□□□□ 0.16
SNHG17-208ENST00000456953 MYO5AQ9Y4I1 1855 aaKnown RBP16.05■□□□□ 0.16
SNHG17-208ENST00000456953 ROBO3Q96MS0 1386 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 A0A1W2PQ45 241 aaPredicted RBP16.04■□□□□ 0.16
SNHG17-208ENST00000456953 A0A1W2PQY0 241 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 GNAI2P04899 355 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 GUCY1A2P33402 732 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 ZAP70P43403 619 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 SEPT2Q15019 361 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 TNNI3KQ59H18 835 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 ANKRD33Q7Z3H0 272 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 ARHGAP45Q92619 1136 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 TOX2Q96NM4 488 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 ASB2Q96Q27 587 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 GAS2L1Q99501 681 aaPredicted RBP16.04■□□□□ 0.16
SNHG17-208ENST00000456953 THEGQ9P2T0 379 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 FPGT-TNNI3KV9GXZ4 949 aa16.04■□□□□ 0.16
SNHG17-208ENST00000456953 REV3LO60673 3130 aa16.03■□□□□ 0.16
SNHG17-208ENST00000456953 PGK1P00558 417 aa16.03■□□□□ 0.16
SNHG17-208ENST00000456953 FCER1AP12319 257 aa16.03■□□□□ 0.16
SNHG17-208ENST00000456953 TMED8Q6PL24 325 aaPredicted RBP16.03■□□□□ 0.16
SNHG17-208ENST00000456953 NCAPG2Q86XI2 1143 aa16.03■□□□□ 0.16
SNHG17-208ENST00000456953 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
SNHG17-208ENST00000456953 CDCA7LQ96GN5 454 aa16.03■□□□□ 0.16
SNHG17-208ENST00000456953 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 A0A1W2PRG0 241 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
SNHG17-208ENST00000456953 PLCD1P51178 756 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 PLS1Q14651 629 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 SLC44A5Q8NCS7 719 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 ADAMTS19Q8TE59 1207 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 FAM122AQ96E09 287 aa16.02■□□□□ 0.16
SNHG17-208ENST00000456953 TRANK1O15050 2925 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 SLC25A27O95847 323 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 TIMP1P01033 207 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 DSG3P32926 999 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
SNHG17-208ENST00000456953 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 MAGEB6Q8N7X4 407 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 PPM1EQ8WY54 764 aa16.01■□□□□ 0.15
SNHG17-208ENST00000456953 UHRF1Q96T88 793 aaPredicted RBP16.01■□□□□ 0.15
SNHG17-208ENST00000456953 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.151e-7■■■□□ 18.6
SNHG17-208ENST00000456953 TSEN34Q9BSV6 310 aaKnown RBP16.01■□□□□ 0.15
SNHG17-208ENST00000456953 MYO9BQ13459 2157 aa16■□□□□ 0.15
SNHG17-208ENST00000456953 MPHOSPH10O00566 681 aaKnown RBP16■□□□□ 0.15
SNHG17-208ENST00000456953 FLOT1O75955 427 aa16■□□□□ 0.15
SNHG17-208ENST00000456953 GABPAQ06546 454 aa16■□□□□ 0.15
SNHG17-208ENST00000456953 NUP133Q8WUM0 1156 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms