RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
PTPRE-204ENST00000455661 FERMT2Q96AC1 680 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 NAPBQ9H115 298 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 RWDD2AQ9UIY3 292 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 LAMB4A4D0S4 1761 aa15.45■□□□□ 0.06
PTPRE-204ENST00000455661 GOLGA6CA6NDK9 693 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 ERLIN2O94905 339 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 GOLGA6DP0CG33 693 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 CDC25AP30304 524 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
PTPRE-204ENST00000455661 WTAPQ15007 396 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 METTL24Q5JXM2 366 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 PAPD7Q5XG87 772 aaKnown RBP15.44■□□□□ 0.06
PTPRE-204ENST00000455661 IQCEQ6IPM2 695 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 CAGE1Q8TC20 777 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 OXER1Q8TDS5 423 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 MYCBPQ99417 103 aaPredicted RBP15.44■□□□□ 0.06
PTPRE-204ENST00000455661 INCENPQ9NQS7 918 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 GOLGA6AQ9NYA3 693 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 TAB2Q9NYJ8 693 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 RGPD5Q99666 1765 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 KCNJ18B7U540 433 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 PATL2C9JE40 543 aaKnown RBP15.44■□□□□ 0.06
PTPRE-204ENST00000455661 KRT83P78385 493 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 UBXN1Q04323 297 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 PAK1Q13153 545 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 KCNJ12Q14500 433 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 TCP11X2Q5H9J9 407 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 CCDC122Q5T0U0 273 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 MFSD6Q6ZSS7 791 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 TMTC2Q8N394 836 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 OR8K1Q8NGG5 319 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 ZNF512BQ96KM6 892 aaPredicted RBP15.44■□□□□ 0.06
PTPRE-204ENST00000455661 STRBPQ96SI9 672 aaKnown RBP15.44■□□□□ 0.06
PTPRE-204ENST00000455661 CHP1Q99653 195 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 NCAPGQ9BPX3 1015 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 HDAC6Q9UBN7 1215 aa15.44■□□□□ 0.06
PTPRE-204ENST00000455661 MYO5AQ9Y4I1 1855 aaKnown RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 GOLGA6BA6NDN3 693 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 RNF225M0QZC1 329 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CYP27B1O15528 508 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 ATP1A1P05023 1023 aaKnown RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 PDE6AP16499 860 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CTDSPL2Q05D32 466 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 AKNAD1Q5T1N1 836 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 MCTP2Q6DN12 878 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CCNI2Q6ZMN8 369 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 RIN2Q8WYP3 895 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 SELENOOQ9BVL4 669 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 TRIM10Q9UDY6 481 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 SHTN1A0MZ66 631 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 KRT86O43790 486 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CCT5P48643 541 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 PPFIA1Q13136 1202 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 KIAA1328Q86T90 577 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 CAPZA3Q96KX2 299 aa15.43■□□□□ 0.06
PTPRE-204ENST00000455661 LUC7L2Q9Y383 392 aaKnown RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 REXO2Q9Y3B8 237 aaKnown RBP15.43■□□□□ 0.06
PTPRE-204ENST00000455661 ZC3H4Q9UPT8 1303 aaKnown RBP15.42■□□□□ 0.06
PTPRE-204ENST00000455661 MEGF6O75095 1541 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 PARP4Q9UKK3 1724 aaKnown RBP15.42■□□□□ 0.06
PTPRE-204ENST00000455661 IRAK1P51617 712 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 RRP12Q5JTH9 1297 aaKnown RBP15.42■□□□□ 0.06
PTPRE-204ENST00000455661 SWT1Q5T5J6 900 aaKnown RBP15.42■□□□□ 0.06
PTPRE-204ENST00000455661 GBP6Q6ZN66 633 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 JAKMIP2Q96AA8 810 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 GDAP1L1Q96MZ0 367 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 CEP89Q96ST8 783 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 PYM1Q9BRP8 204 aaKnown RBP15.42■□□□□ 0.06
PTPRE-204ENST00000455661 NUP188Q5SRE5 1749 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 EXOC5O00471 708 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 SRGAP2O75044 1071 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 COBLO75128 1261 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 A1BGP04217 495 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 USP8P40818 1118 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 CCDC91Q7Z6B0 441 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 FANCBQ8NB91 859 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 NUP133Q8WUM0 1156 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 CAPS2Q9BXY5 557 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 KAT14Q9H8E8 782 aa15.42■□□□□ 0.06
PTPRE-204ENST00000455661 KRT2P35908 639 aa15.41■□□□□ 0.06
PTPRE-204ENST00000455661 RCAN1P53805 252 aa15.41■□□□□ 0.06
PTPRE-204ENST00000455661 ZNF662Q6ZS27 426 aa15.41■□□□□ 0.06
PTPRE-204ENST00000455661 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
PTPRE-204ENST00000455661 NELFBQ8WX92 580 aa15.41■□□□□ 0.06
PTPRE-204ENST00000455661 RMND1Q9NWS8 449 aa15.41■□□□□ 0.06
PTPRE-204ENST00000455661 FAM169AQ9Y6X4 670 aa15.41■□□□□ 0.06
PTPRE-204ENST00000455661 GOLGA8KD6RF30 607 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 ZMYND10O75800 440 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
PTPRE-204ENST00000455661 LDHAL6AQ6ZMR3 332 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
PTPRE-204ENST00000455661 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 1763.4 ms