RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RIOK1Q9BRS2 568 aaKnown RBP17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 COL25A1Q9BXS0 654 aaPredicted RBP17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 MOV10L1Q9BXT6 1211 aaKnown RBP17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 CRNKL1Q9BZJ0 848 aaKnown RBP17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 SPATC1LQ9H0A9 340 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 SH2D4AQ9H788 454 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 RLFQ13129 1914 aa17.35■□□□□ 0.37
LYSMD3-202ENST00000453259 BCAR3O75815 825 aa17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 ATN1P54259 1190 aaPredicted RBP17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 ROBO3Q96MS0 1386 aa17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 NDUFB9Q9Y6M9 179 aa17.34■□□□□ 0.37
LYSMD3-202ENST00000453259 MAGEB6P1A0A0J9YX57 407 aa17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 TRPV1Q8NER1 839 aa17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 ATP11BQ9Y2G3 1177 aa17.33■□□□□ 0.36
LYSMD3-202ENST00000453259 LAMA2P24043 3122 aaKnown RBP17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 ERCC3P19447 782 aa17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 GUCY1A2P33402 732 aa17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 PLCD1P51178 756 aa17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 SEPT2Q15019 361 aa17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 NAV1Q8NEY1 1877 aa17.32■□□□□ 0.36
LYSMD3-202ENST00000453259 SLC25A27O95847 323 aa17.31■□□□□ 0.36
LYSMD3-202ENST00000453259 GJC2Q5T442 439 aaPredicted RBP17.31■□□□□ 0.36
LYSMD3-202ENST00000453259 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
LYSMD3-202ENST00000453259 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
LYSMD3-202ENST00000453259 TNNQ9UQP3 1299 aa17.31■□□□□ 0.36
LYSMD3-202ENST00000453259 FCER1AP12319 257 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 DSG3P32926 999 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 COPB2P35606 906 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 MAML3Q96JK9 1138 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 CCDC17Q96LX7 622 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 CDX2Q99626 313 aaPredicted RBP17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 ANTXR1Q9H6X2 564 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 PDLIM7Q9NR12 457 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
LYSMD3-202ENST00000453259 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 WDR46O15213 610 aaKnown RBP17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 LRRC41Q15345 812 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 SHHQ15465 462 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 TRIM60Q495X7 471 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 SLC9C2Q5TAH2 1124 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 AACSQ86V21 672 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 PRDM5Q9NQX1 630 aaPredicted RBP17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 PHF24Q9UPV7 400 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 TMX2Q9Y320 296 aa17.29■□□□□ 0.36
LYSMD3-202ENST00000453259 COBLO75128 1261 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 FLOT1O75955 427 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 RARBP10826 455 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 PDE6AP16499 860 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 RNF180Q86T96 592 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 BADQ92934 168 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 VCPKMTQ9H867 229 aa17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 DCP1AQ9NPI6 582 aaPredicted RBP17.28■□□□□ 0.36
LYSMD3-202ENST00000453259 ADCYAP1R1P41586 468 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 ICA1Q05084 483 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 CEP85Q6P2H3 762 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 NCAPG2Q86XI2 1143 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 AMOTL1Q8IY63 956 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 MSL3Q8N5Y2 521 aaKnown RBP17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 FAM161BQ96MY7 647 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 XPNPEP3Q9NQH7 507 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 ATP8A2Q9NTI2 1148 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 ADAMTS5Q9UNA0 930 aa17.27■□□□□ 0.36
LYSMD3-202ENST00000453259 CLTBP09497 229 aa17.26■□□□□ 0.35
LYSMD3-202ENST00000453259 PLS1Q14651 629 aa17.26■□□□□ 0.35
LYSMD3-202ENST00000453259 FAM47AQ5JRC9 791 aa17.26■□□□□ 0.35
LYSMD3-202ENST00000453259 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
LYSMD3-202ENST00000453259 TOX2Q96NM4 488 aa17.26■□□□□ 0.35
LYSMD3-202ENST00000453259 C1orf115Q9H7X2 142 aa17.26■□□□□ 0.35
LYSMD3-202ENST00000453259 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 KIAA0355O15063 1070 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 TLE2Q04725 743 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 KCTD2Q14681 263 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 ATG4CQ96DT6 458 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 DDRGK1Q96HY6 314 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 TINF2Q9BSI4 451 aa17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
LYSMD3-202ENST00000453259 TCRBV5S4A2TA0A5A2 114 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 TRIM43BA6NCK2 446 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 AKR1A1P14550 325 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 ANKRD33Q7Z3H0 272 aa17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 TRIM43Q96BQ3 446 aaPredicted RBP17.24■□□□□ 0.35
LYSMD3-202ENST00000453259 MMP19Q99542 508 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms