RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 RABEP2Q9H5N1 569 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 REXO2Q9Y3B8 237 aaKnown RBP19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 SAR1BQ9Y6B6 198 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 PSMD14O00487 310 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 N4BP3O15049 544 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 ATP1A1P05023 1023 aaKnown RBP19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 GUCY1A2P33402 732 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 ADD2P35612 726 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 KCNV1Q6PIU1 500 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 ZCRB1Q8TBF4 217 aaKnown RBP19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 BCAS4Q8TDM0 211 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 CAPZA3Q96KX2 299 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 CHP1Q99653 195 aa19.35■□□□□ 0.69
SCUBE2-202ENST00000450649 PPP1R3GB7ZBB8 358 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 PCCAP05165 728 aaPredicted RBP19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 KRT9P35527 623 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 KRT31Q15323 416 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 CXorf56Q9H5V9 222 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 EPN1Q9Y6I3 576 aaPredicted RBP19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 WDR17Q8IZU2 1322 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 PSEN1P49768 467 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 IFIT5Q13325 482 aaKnown RBP19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 IGDCC4Q8TDY8 1250 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 VPS16Q9H269 839 aa19.34■□□□□ 0.69
SCUBE2-202ENST00000450649 ATRNO75882 1429 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 A0A087X0B3 334 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 NDUFA10O95299 355 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 ATF3P18847 181 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 PPFIA1Q13136 1202 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 CCNI2Q6ZMN8 369 aaPredicted RBP19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 SECISBP2LQ93073 1101 aaKnown RBP19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 CAPS2Q9BXY5 557 aa19.33■□□□□ 0.69
SCUBE2-202ENST00000450649 STK36Q9NRP7 1315 aa19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 GOLGA6BA6NDN3 693 aa19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 MCAMP43121 646 aa19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 NR5A1Q13285 461 aa19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 TMEM87BQ96K49 555 aa19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 ZNF512BQ96KM6 892 aaPredicted RBP19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 LY9Q9HBG7 655 aa19.33■□□□□ 0.68
SCUBE2-202ENST00000450649 FMNL1O95466 1100 aaPredicted RBP19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 NKX1-1Q15270 411 aaPredicted RBP19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 ANKRD20A12PQ8NF67 263 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 INPP5BP32019 993 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 DPYDQ12882 1025 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 TMEM67Q5HYA8 995 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 PAGE5Q96GU1 130 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 HAUS4Q9H6D7 363 aa19.32■□□□□ 0.68
SCUBE2-202ENST00000450649 SHTN1A0MZ66 631 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 MAP2K2P36507 400 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 TTF1Q15361 905 aaPredicted RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 PAPD7Q5XG87 772 aaKnown RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 WASF1Q92558 559 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 EPSTI1Q96J88 318 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 RPGRIP1Q96KN7 1286 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 FOXP1Q9H334 677 aaPredicted RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 STRN4Q9NRL3 753 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 LIMA1Q9UHB6 759 aaKnown RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 TFR2Q9UP52 801 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 RIPOR2Q9Y4F9 1068 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 RIC1Q4ADV7 1423 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 MYH7P12883 1935 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 EIF3HO15372 352 aaKnown RBP eCLIP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 UBE3CQ15386 1083 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 FAM89AQ96GI7 184 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 TAB2Q9NYJ8 693 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 TNS2Q63HR2 1409 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 GRIN2DO15399 1336 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 APPP05067 770 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 USP8P40818 1118 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 GNGT1P63211 74 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 CKAP4Q07065 602 aaKnown RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 TRIM14Q14142 442 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 SH3RF1Q7Z6J0 888 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 SGMS1Q86VZ5 419 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 GSDMAQ96QA5 445 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 CEP131Q9UPN4 1083 aa19.31■□□□□ 0.68
SCUBE2-202ENST00000450649 PAPPAQ13219 1627 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 LRRC10BA6NIK2 292 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 COPB1P53618 953 aaKnown RBP19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 METTL24Q5JXM2 366 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 SLC12A7Q9Y666 1083 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 CCDC122Q5T0U0 273 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 JAKMIP2Q96AA8 810 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 INCENPQ9NQS7 918 aa19.3■□□□□ 0.68
SCUBE2-202ENST00000450649 IFNAR1P17181 557 aa19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 CAGE1Q8TC20 777 aa19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 SAMM50Q9Y512 469 aa19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 MYO5AQ9Y4I1 1855 aaKnown RBP19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 TTC19Q6DKK2 380 aaPredicted RBP19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 HINFPQ9BQA5 517 aa19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 SPATA31A3Q5VYP0 1347 aa19.29■□□□□ 0.68
SCUBE2-202ENST00000450649 HERVK_113P62684 666 aa19.28■□□□□ 0.68
SCUBE2-202ENST00000450649 GBP6Q6ZN66 633 aa19.28■□□□□ 0.68
SCUBE2-202ENST00000450649 CNPY4Q8N129 248 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms