RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	LUC7L	Q9NQ29	371 aa	Known RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	CHPF2	Q9P2E5	772 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	ATXN10	Q9UBB4	475 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	ATAD2	Q6PL18	1390 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	ATXN2	Q99700	1313 aa	Known RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	CCDC69	A6NI79	296 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	EIF4E1B	A6NMX2	242 aa	Known RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	BECN2	A8MW95	431 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	HMGB1P1	B2RPK0	211 aa	Predicted RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	BBOX1	O75936	387 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	TMCC1	O94876	653 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	CCDC192	P0DO97	292 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	HSPA8	P11142	646 aa	Known RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	NFKBIA	P25963	317 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	GUCY2F	P51841	1108 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	POLE2	P56282	527 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	CEBPZ	Q03701	1054 aa	Known RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	ITGA7	Q13683	1181 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	BRD3	Q15059	726 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	CCDC152	Q4G0S7	254 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	POTEE	Q6S8J3	1075 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	B4GALNT4	Q76KP1	1039 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	PLA2G4D	Q86XP0	818 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	ARHGAP18	Q8N392	663 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	STAMBPL1	Q96FJ0	436 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	SRPK1	Q96SB4	655 aa	Known RBP	7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	COMMD8	Q9NX08	183 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	TMED5	Q9Y3A6	229 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329	CCDC61	Q9Y6R9	512 aa		7.6	□□□□□ -1.19
TRIM6-205	ENST00000445329		A0A1W2PP64	1363 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	PALM3	A6NDB9	673 aa	Predicted RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	TMEM247	A6NEH6	219 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	NDUFAB1	O14561	156 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	LIN7A	O14910	233 aa	Predicted RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	SPTLC2	O15270	562 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	MTRF1	O75570	445 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	GNAT2	P19087	354 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	CSE1L	P55060	971 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	EIF4A2	Q14240	407 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	COL19A1	Q14993	1142 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	C3orf67	Q6ZVT6	689 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	PPP1R13B	Q96KQ4	1090 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	IWS1	Q96ST2	819 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	NUP58	Q9BVL2	599 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	NAT10	Q9H0A0	1025 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	GBP3	Q9H0R5	595 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	C19orf44	Q9H6X5	657 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	WDR35	Q9P2L0	1181 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	ATP6V0A2	Q9Y487	856 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	BLM	P54132	1417 aa	Predicted RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	GOLGA6L7	A0A1B0GV03	622 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	ALDH3A1	P30838	453 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	PHEX	P78562	749 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	BLMH	Q13867	455 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	ARHGEF6	Q15052	776 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	PLCB4	Q15147	1175 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	GPR162	Q16538	588 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	PABPC1L	Q4VXU2	614 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	CREB3L3	Q68CJ9	461 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	CAPN12	Q6ZSI9	719 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	DDX27	Q96GQ7	796 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	NEUROD6	Q96NK8	337 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	FAM167B	Q9BTA0	163 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	EHD4	Q9H223	541 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	KAT14	Q9H8E8	782 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	EFR3B	Q9Y2G0	817 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	R3HDM2	Q9Y2K5	976 aa	Known RBP	7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	C15orf41	Q9Y2V0	281 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	TTC41P	Q6P2S7	1318 aa		7.59	□□□□□ -1.19
TRIM6-205	ENST00000445329	LRRD1	A4D1F6	860 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329		A6NHS1	94 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	RASSF10	A6NK89	507 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	KDM1A	O60341	852 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	TBCA	O75347	108 aa	Known RBP	7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	PDGFRB	P09619	1106 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	IRAK1	P51617	712 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	PTF1A	Q7RTS3	328 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	TRMT2A	Q8IZ69	625 aa	Known RBP	7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	CCDC82	Q8N4S0	544 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	PDILT	Q8N807	584 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	WDR66	Q8TBY9	1149 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	GIMAP1	Q8WWP7	306 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	DHTKD1	Q96HY7	919 aa	Predicted RBP	7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	ABHD8	Q96I13	439 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	ORAI2	Q96SN7	254 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	OSBPL1A	Q9BXW6	950 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	SUGCT	Q9HAC7	445 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	IP6K2	Q9UHH9	426 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	CARD8	Q9Y2G2	431 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	L3MBTL1	Q9Y468	752 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	GMEB1	Q9Y692	573 aa		7.59	□□□□□ -1.2
TRIM6-205	ENST00000445329	hCG_2014768	A0A024R1R8	64 aa		7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	HSPA1A	P0DMV8	641 aa	Known RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	HSPA1B	P0DMV9	641 aa	Known RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	TCF7	P36402	384 aa	Predicted RBP	7.58	□□□□□ -1.2
TRIM6-205	ENST00000445329	USP5	P45974	858 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms