RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ERCC3P19447 782 aa17.09■□□□□ 0.33
LINC00642-202ENST00000442515 AKNAD1Q5T1N1 836 aa17.09■□□□□ 0.33
LINC00642-202ENST00000442515 XPNPEP3Q9NQH7 507 aa17.09■□□□□ 0.33
LINC00642-202ENST00000442515 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
LINC00642-202ENST00000442515 A0A1W2PQ45 241 aaPredicted RBP17.08■□□□□ 0.32
LINC00642-202ENST00000442515 A0A1W2PQY0 241 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.32
LINC00642-202ENST00000442515 MRPS5P82675 430 aaKnown RBP17.08■□□□□ 0.32
LINC00642-202ENST00000442515 MTX1Q13505 466 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 ABCB5Q2M3G0 1257 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 SHCBP1Q8NEM2 672 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 PBX4Q9BYU1 374 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 SERPINB13Q9UIV8 391 aa17.08■□□□□ 0.32
LINC00642-202ENST00000442515 E9PSI1 815 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 PGK1P00558 417 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 RARBP10826 455 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
LINC00642-202ENST00000442515 PBX2P40425 430 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 CERKLQ49MI3 558 aaPredicted RBP17.07■□□□□ 0.32
LINC00642-202ENST00000442515 RNF180Q86T96 592 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC00642-202ENST00000442515 EHD4Q9H223 541 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 SLC5A4Q9NY91 659 aa17.07■□□□□ 0.32
LINC00642-202ENST00000442515 CYP2E1P05181 493 aaPredicted RBP17.06■□□□□ 0.32
LINC00642-202ENST00000442515 FAAP100Q0VG06 881 aa17.06■□□□□ 0.32
LINC00642-202ENST00000442515 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
LINC00642-202ENST00000442515 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
LINC00642-202ENST00000442515 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
LINC00642-202ENST00000442515 REV3LO60673 3130 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 GRXCR1A8MXD5 290 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 GUCY1A2P33402 732 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 COG2Q14746 738 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 TTC39AQ5SRH9 613 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 CCDC129Q6ZRS4 1044 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 ANKRD33Q7Z3H0 272 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 IL27Q8NEV9 243 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
LINC00642-202ENST00000442515 TANGO6Q9C0B7 1094 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 CABP5Q9NP86 173 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 HOXC10Q9NYD6 342 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
LINC00642-202ENST00000442515 SHMT1P34896 483 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 USP5P45974 858 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 PLS1Q14651 629 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
LINC00642-202ENST00000442515 MIGA1Q8NAN2 632 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 LENG1Q96BZ8 264 aaPredicted RBP17.04■□□□□ 0.32
LINC00642-202ENST00000442515 TOX2Q96NM4 488 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
LINC00642-202ENST00000442515 MROH8Q9H579 483 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
LINC00642-202ENST00000442515 BDP1A6H8Y1 2624 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 NCOR1O75376 2440 aa17.04■□□□□ 0.32
LINC00642-202ENST00000442515 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 TIMP1P01033 207 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 CYP7A1P22680 504 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 SEPT2Q15019 361 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 RASIP1Q5U651 963 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 MB21D1Q8N884 522 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 STARD7Q9NQZ5 370 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 TBX21Q9UL17 535 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
LINC00642-202ENST00000442515 IGSF3O75054 1194 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 GNAI3P08754 354 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 TAL1P17542 331 aaPredicted RBP17.02■□□□□ 0.32
LINC00642-202ENST00000442515 IGFBP4P22692 258 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 ZAP70P43403 619 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC00642-202ENST00000442515 TMEM240Q5SV17 173 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 DBNDD2Q9BQY9 259 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.32
LINC00642-202ENST00000442515 A0A0G2JMZ2 1700 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 FCER1AP12319 257 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 AKR1A1P14550 325 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 PLCD1P51178 756 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 SLFN5Q08AF3 891 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00642-202ENST00000442515 CCDC158Q5M9N0 1113 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 MFSD5Q6N075 450 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 CDK5RAP2Q96SN8 1893 aa17.01■□□□□ 0.31
LINC00642-202ENST00000442515 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 ANP32CO43423 234 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 PGK2P07205 417 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 ZNF865P0CJ78 1059 aaPredicted RBP17■□□□□ 0.31
LINC00642-202ENST00000442515 DSG3P32926 999 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 ACLYP53396 1101 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 TNNI3KQ59H18 835 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms