RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 IGHDP01880 384 aa22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 RASA1P20936 1047 aa22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 IFNL3Q8IZI9 196 aa22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 USP6NLQ92738 828 aa22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 ARHGEF10LQ9HCE6 1279 aa22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 BTBD7Q9P203 1132 aa22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 ZBTB47Q9UFB7 747 aaPredicted RBP22.65■■□□□ 1.22
HMGB3P22-201ENST00000442010 PRPF38BQ5VTL8 546 aaKnown RBP22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 GPR142Q7Z601 462 aa22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 NKX2-3Q8TAU0 364 aa22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 LPAR1Q92633 364 aa22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 RWDD1Q9H446 243 aaPredicted RBP22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 VCPKMTQ9H867 229 aa22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 KANSL2Q9H9L4 492 aa22.64■■□□□ 1.21
HMGB3P22-201ENST00000442010 MINDY4BA8MYZ0 360 aa22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 EEF2P13639 858 aaKnown RBP22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 MORN1Q5T089 497 aa22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 EVI5LQ96CN4 794 aa22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 NUDT12Q9BQG2 462 aa22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 LNPKQ9C0E8 428 aa22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 PAK6Q9NQU5 681 aaPredicted RBP22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 ZNFX1Q9P2E3 1918 aaKnown RBP22.63■■□□□ 1.21
HMGB3P22-201ENST00000442010 FOXP2O15409 715 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 HMGCRP04035 888 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 XRCC5P13010 732 aaKnown RBP22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 TDO2P48775 406 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 COG2Q14746 738 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 UBE2Q1Q7Z7E8 422 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 U2AF1L4Q8WU68 220 aaKnown RBP22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 SOCS4Q8WXH5 440 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 TRIB2Q92519 343 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 SH2D4AQ9H788 454 aa22.62■■□□□ 1.21
HMGB3P22-201ENST00000442010 SGPL1O95470 568 aa22.61■■□□□ 1.21
HMGB3P22-201ENST00000442010 CYP2B6P20813 491 aa22.61■■□□□ 1.21
HMGB3P22-201ENST00000442010 PLEKHH3Q7Z736 793 aa22.61■■□□□ 1.21
HMGB3P22-201ENST00000442010 STK11IPQ8N1F8 1099 aa22.61■■□□□ 1.21
HMGB3P22-201ENST00000442010 HOXC10Q9NYD6 342 aa22.61■■□□□ 1.21
HMGB3P22-201ENST00000442010 SUPT16HQ9Y5B9 1047 aaKnown RBP22.61■■□□□ 1.21
HMGB3P22-201ENST00000442010 APPP05067 770 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 DSG3P32926 999 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 CCNA1P78396 465 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 TRIM32Q13049 653 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 SPICE1Q8N0Z3 855 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 TANGO6Q9C0B7 1094 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 MKNK2Q9HBH9 465 aa22.6■■□□□ 1.21
HMGB3P22-201ENST00000442010 ZNF236Q9UL36 1845 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 IGKV6D-41A0A0C4DH26 115 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 WDR46O15213 610 aaKnown RBP22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 NUCB1Q02818 461 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 CCDC129Q6ZRS4 1044 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 NACAP1Q9BZK3 213 aa22.59■■□□□ 1.21
HMGB3P22-201ENST00000442010 CEP290O15078 2479 aa22.58■■□□□ 1.21
HMGB3P22-201ENST00000442010 MAP3K21Q5TCX8 1036 aa22.58■■□□□ 1.21
HMGB3P22-201ENST00000442010 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.21
HMGB3P22-201ENST00000442010 CCAR1Q8IX12 1150 aaKnown RBP22.58■■□□□ 1.21
HMGB3P22-201ENST00000442010 CRISPLD2Q9H0B8 497 aa22.58■■□□□ 1.21
HMGB3P22-201ENST00000442010 NYAP2Q9P242 653 aa22.58■■□□□ 1.21
HMGB3P22-201ENST00000442010 PRDM1O75626 825 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 PTPREP23469 700 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 RGS2P41220 211 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 ATP2B2Q01814 1243 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 PLEKHM2Q8IWE5 1019 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 DEFB118Q96PH6 123 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 MOV10L1Q9BXT6 1211 aaKnown RBP22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 NAPBQ9H115 298 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 OSBPL3Q9H4L5 887 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 HELLSQ9NRZ9 838 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 ADAMTS5Q9UNA0 930 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 RPTORQ8N122 1335 aa22.57■■□□□ 1.2
HMGB3P22-201ENST00000442010 PLIN4Q96Q06 1357 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 FLOT1O75955 427 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 CAPN2P17655 700 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 PPARAQ07869 468 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 MAP2K5Q13163 448 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 VPS53Q5VIR6 699 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 TRMT44Q8IYL2 757 aaKnown RBP22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 MB21D1Q8N884 522 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 ATG4CQ96DT6 458 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 APBA2Q99767 749 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 SPATC1LQ9H0A9 340 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 ZNF287Q9HBT7 754 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 GOPCQ9HD26 462 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 ALPK3Q96L96 1907 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 FRMPD3Q5JV73 1810 aa22.56■■□□□ 1.2
HMGB3P22-201ENST00000442010 SLC15A5A6NIM6 579 aa22.55■■□□□ 1.2
HMGB3P22-201ENST00000442010 GRB14Q14449 540 aa22.55■■□□□ 1.2
HMGB3P22-201ENST00000442010 CCL14Q16627 93 aa22.55■■□□□ 1.2
HMGB3P22-201ENST00000442010 ZNF444Q8N0Y2 327 aaPredicted RBP22.55■■□□□ 1.2
HMGB3P22-201ENST00000442010 SHCBP1Q8NEM2 672 aa22.55■■□□□ 1.2
HMGB3P22-201ENST00000442010 FAM227BQ96M60 508 aa22.55■■□□□ 1.2
HMGB3P22-201ENST00000442010 A0A0D9SFI3 127 aa22.54■■□□□ 1.2
HMGB3P22-201ENST00000442010 HOXC6P09630 235 aa22.54■■□□□ 1.2
HMGB3P22-201ENST00000442010 MKL1Q969V6 931 aa22.54■■□□□ 1.2
HMGB3P22-201ENST00000442010 HMX1Q9NP08 348 aaPredicted RBP22.54■■□□□ 1.2
HMGB3P22-201ENST00000442010 FBXO28Q9NVF7 368 aa22.54■■□□□ 1.2
HMGB3P22-201ENST00000442010 IGHA2P01877 340 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 PRKAR2AP13861 404 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms