RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 FIBPO43427 364 aa7.27□□□□□ -1.25
PUM1-207ENST00000440538 PPP1R12BO60237 982 aaPredicted RBP7.27□□□□□ -1.25
PUM1-207ENST00000440538 MTERF4Q7Z6M4 381 aaKnown RBP7.27□□□□□ -1.25
PUM1-207ENST00000440538 FAM184AQ8NB25 1140 aa7.27□□□□□ -1.25
PUM1-207ENST00000440538 FAM151AQ8WW52 585 aa7.27□□□□□ -1.25
PUM1-207ENST00000440538 ZNF341Q9BYN7 854 aa7.27□□□□□ -1.25
PUM1-207ENST00000440538 CEBPZQ03701 1054 aaKnown RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 CPXCR1Q8N123 301 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 ENAHQ8N8S7 591 aaPredicted RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 ZSCAN10Q96SZ4 725 aaPredicted RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 SLC26A6Q9BXS9 759 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 PICK1Q9NRD5 415 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 BAZ2AQ9UIF9 1905 aaKnown RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 CCDC88AQ3V6T2 1871 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 MBD3O95983 291 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 EEF2P13639 858 aaKnown RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 METAP2P50579 478 aaKnown RBP eCLIP7.26□□□□□ -1.25
PUM1-207ENST00000440538 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 HOMER2Q9NSB8 354 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 SMC3Q9UQE7 1217 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 MYH2Q9UKX2 1941 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 POTECB2RU33 542 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 ZBTB43O43298 467 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 SHMT1P34896 483 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 PLS1Q14651 629 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 CATIPQ7Z7H3 387 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 TANGO6Q9C0B7 1094 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 ZNF287Q9HBT7 754 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 CGNQ9P2M7 1197 aaKnown RBP7.26□□□□□ -1.25
PUM1-207ENST00000440538 LIMCH1Q9UPQ0 1083 aa7.26□□□□□ -1.25
PUM1-207ENST00000440538 SNED1Q8TER0 1413 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 ADAMTSL1Q8N6G6 1762 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 TOB2Q14106 344 aaPredicted RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 TTBK2Q6IQ55 1244 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 GADL1Q6ZQY3 521 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 PNMA1Q8ND90 353 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 CDCA5Q96FF9 252 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 VPS33BQ9H267 617 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 CNNM2Q9H8M5 875 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 ZSWIM6Q9HCJ5 1215 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 PDS5AQ29RF7 1337 aaKnown RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 USP17L5A8MUK1 530 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 HMGCS2P54868 508 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 ZNF280AP59817 542 aaPredicted RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 AKAP17AQ02040 695 aaKnown RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 GNL2Q13823 731 aaKnown RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 UTP14CQ5TAP6 766 aaKnown RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 CDC37L1Q7L3B6 337 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 MB21D2Q8IYB1 491 aaPredicted RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 IL17RBQ9NRM6 502 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 CSADQ9Y600 493 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 PLEKHA8P1O95397 391 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 HDLBPQ00341 1268 aaKnown RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 LRMPQ12912 555 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 MTMR2Q13614 643 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 CAMK4Q16566 473 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 USH1GQ495M9 461 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 ZNF771Q7L3S4 317 aaPredicted RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 ZNF654Q8IZM8 581 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 TMEM47Q9BQJ4 181 aa7.25□□□□□ -1.25
PUM1-207ENST00000440538 DHX36Q9H2U1 1008 aaKnown RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.25□□□□□ -1.251e-31■■■■□ 21.7
PUM1-207ENST00000440538 V9GYY5 206 aaPredicted RBP7.25□□□□□ -1.25
PUM1-207ENST00000440538 CNTNAP1P78357 1384 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 SLC1A4P43007 532 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 HUNKP57058 714 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 FAM173BQ6P4H8 233 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 CCDC174Q6PII3 467 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 APOBEC3FQ8IUX4 373 aaKnown RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 CTCFLQ8NI51 663 aaPredicted RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 STAG1Q8WVM7 1258 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 ZFP91Q96JP5 570 aaPredicted RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 FBXO28Q9NVF7 368 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 MKRN1Q9UHC7 482 aaKnown RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 NRBP1Q9UHY1 535 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 CTDP1Q9Y5B0 961 aaPredicted RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 H3BQV1 296 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 SUPT20HL1Q3ZLR7 823 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 IFFO2Q5TF58 517 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 GPKOWQ92917 476 aaPredicted RBP eCLIP7.24□□□□□ -1.252e-6■■■■□ 23.3
PUM1-207ENST00000440538 IDI2Q9BXS1 227 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 V9GY48 417 aaPredicted RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 ENTPD3O75355 529 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 PTGS1P23219 599 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 CDC27P30260 824 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 HMGN5P82970 282 aaKnown RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 SCRN1Q12765 414 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 RTN1Q16799 776 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 PNMA8AQ86V59 439 aaPredicted RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 FOXP4Q8IVH2 680 aaPredicted RBP7.24□□□□□ -1.25
PUM1-207ENST00000440538 PRIMPOLQ96LW4 560 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 PAGR1Q9BTK6 254 aa7.24□□□□□ -1.25
PUM1-207ENST00000440538 TMEM232C9JQI7 657 aa7.23□□□□□ -1.25
PUM1-207ENST00000440538 HMGB1P09429 215 aaKnown RBP7.23□□□□□ -1.25
PUM1-207ENST00000440538 GJB2P29033 226 aa7.23□□□□□ -1.25
PUM1-207ENST00000440538 PDIA3P30101 505 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms