RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PTGS1P23219 599 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CTAGE6Q86UF2 777 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CTAGE4Q8IX94 777 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 SH3GLB2Q9NR46 395 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 USP8P40818 1118 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 BTDP43251 543 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 IWS1Q96ST2 819 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 TMCO5BA8MYB1 307 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 NAP1L3Q99457 506 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 SMCO2A6NFE2 343 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 SH2B2O14492 632 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 TERF1P54274 439 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 BRIP1Q9BX63 1249 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 DHX36Q9H2U1 1008 aaKnown RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 MMRN2Q9H8L6 949 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 ZBED4O75132 1171 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 APOA5Q6Q788 366 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 ZNF512BQ96KM6 892 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 IFFO1Q0D2I5 559 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 CERKLQ49MI3 558 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 IGSF22Q8N9C0 903 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 GOLGA5Q8TBA6 731 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 COL14A1Q05707 1796 aaKnown RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 FANCCQ00597 558 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
PTCH1-208ENST00000430669 SEC62Q99442 399 aaKnown RBP12.91□□□□□ -0.34
PTCH1-208ENST00000430669 ABCC6O95255 1503 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 FAM193AP78312 1265 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 IFT74Q96LB3 600 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.343e-7■■■■■ 56.2
PTCH1-208ENST00000430669 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 ADCK5Q3MIX3 580 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 ABCD1P33897 745 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 TMTC1Q8IUR5 882 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 ARFGEF2Q9Y6D5 1785 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 SETD1AO15047 1707 aaKnown RBP12.9□□□□□ -0.34
PTCH1-208ENST00000430669 CEP128Q6ZU80 1094 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
PTCH1-208ENST00000430669 PRDM1O75626 825 aa12.9□□□□□ -0.35
PTCH1-208ENST00000430669 CTNNA2P26232 953 aa12.9□□□□□ -0.35
PTCH1-208ENST00000430669 NEK8Q86SG6 692 aa12.9□□□□□ -0.35
PTCH1-208ENST00000430669 CSGALNACT2Q8N6G5 542 aa12.9□□□□□ -0.35
PTCH1-208ENST00000430669 TMEM63CQ9P1W3 806 aa12.9□□□□□ -0.35
PTCH1-208ENST00000430669 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 ARHGAP6O43182 974 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 STX10O60499 249 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 PHACTR2O75167 634 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 CTR9Q6PD62 1173 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 HOOK3Q86VS8 718 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 FOXO4P98177 505 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
PTCH1-208ENST00000430669 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
PTCH1-208ENST00000430669 SUGT1Q9Y2Z0 365 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 MRPL11Q9Y3B7 192 aaKnown RBP12.89□□□□□ -0.35
PTCH1-208ENST00000430669 NEBLO76041 1014 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 SERPINB2P05120 415 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 PFKFB1P16118 471 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 MCAMP43121 646 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 TTC14Q96N46 770 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 MYL10Q9BUA6 226 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 PSTPIP2Q9H939 334 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 LRWD1Q9UFC0 647 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-208ENST00000430669 H7C1D1 291 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 ALX1Q15699 326 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-208ENST00000430669 HSF2BPO75031 334 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 RXRBP28702 533 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 MST1RQ04912 1400 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
PTCH1-208ENST00000430669 TRAF5O00463 557 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 GCFC2P16383 781 aaKnown RBP12.88□□□□□ -0.35
PTCH1-208ENST00000430669 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 KCNJ14Q9UNX9 436 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 SLC39A14Q15043 492 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 PCDHA4Q9UN74 947 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 CETN3O15182 167 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 OR52Z1P0C646 297 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 SPECC1LQ69YQ0 1117 aa12.88□□□□□ -0.35
PTCH1-208ENST00000430669 CABP7Q86V35 215 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms