RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 SPICE1Q8N0Z3 855 aa29.66■■■□□ 2.34
CPNE1-212ENST00000430570 LRRC47Q8N1G4 583 aaKnown RBP29.66■■■□□ 2.34
CPNE1-212ENST00000430570 ZFYVE28Q9HCC9 887 aa29.66■■■□□ 2.34
CPNE1-212ENST00000430570 MYH4Q9Y623 1939 aa29.66■■■□□ 2.34
CPNE1-212ENST00000430570 STX8Q9UNK0 236 aa29.65■■■□□ 2.34
CPNE1-212ENST00000430570 HOXA7P31268 230 aaPredicted RBP29.64■■■□□ 2.34
CPNE1-212ENST00000430570 TRDNQ13061 729 aa29.64■■■□□ 2.34
CPNE1-212ENST00000430570 COL9A3Q14050 684 aaPredicted RBP29.64■■■□□ 2.34
CPNE1-212ENST00000430570 NCOA7Q8NI08 942 aa29.64■■■□□ 2.34
CPNE1-212ENST00000430570 USP26Q9BXU7 913 aa29.64■■■□□ 2.34
CPNE1-212ENST00000430570 F5H6K3 240 aa29.63■■■□□ 2.33
CPNE1-212ENST00000430570 RAD21O60216 631 aa29.63■■■□□ 2.33
CPNE1-212ENST00000430570 CTCFP49711 727 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-212ENST00000430570 NT5C2P49902 561 aa29.63■■■□□ 2.33
CPNE1-212ENST00000430570 KLRC3Q07444 240 aa29.63■■■□□ 2.33
CPNE1-212ENST00000430570 RCSD1Q6JBY9 416 aa29.63■■■□□ 2.33
CPNE1-212ENST00000430570 ASCC2Q9H1I8 757 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-212ENST00000430570 RPAP3Q9H6T3 665 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-212ENST00000430570 HSPA4P34932 840 aa29.62■■■□□ 2.33
CPNE1-212ENST00000430570 LBX1P52954 281 aa29.62■■■□□ 2.33
CPNE1-212ENST00000430570 PABPC4Q13310 644 aaKnown RBP eCLIP29.62■■■□□ 2.337e-7■■■□□ 14.8
CPNE1-212ENST00000430570 RNF20Q5VTR2 975 aa29.62■■■□□ 2.33
CPNE1-212ENST00000430570 CATSPERGQ6ZRH7 1159 aa29.62■■■□□ 2.33
CPNE1-212ENST00000430570 LPAR1Q92633 364 aa29.62■■■□□ 2.33
CPNE1-212ENST00000430570 PARK7Q99497 189 aaKnown RBP29.62■■■□□ 2.33
CPNE1-212ENST00000430570 GOPCQ9HD26 462 aa29.62■■■□□ 2.33
CPNE1-212ENST00000430570 ADGRA2Q96PE1 1338 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L15C9J2P7 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L13C9JLJ4 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L11C9JVI0 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L18D6R9N7 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L22D6RA61 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L17D6RBQ6 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L19D6RCP7 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L20D6RJB6 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 TLR2O60603 784 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 NDUFB10O96000 172 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 OSBPP22059 807 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 USP17L24Q0WX57 530 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 PPP4R3BQ5MIZ7 849 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 IQCA1Q86XH1 822 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 MB21D2Q8IYB1 491 aaPredicted RBP29.61■■■□□ 2.33
CPNE1-212ENST00000430570 KCNB2Q92953 911 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 ZSCAN10Q96SZ4 725 aaPredicted RBP29.61■■■□□ 2.33
CPNE1-212ENST00000430570 P2RX7Q99572 595 aaKnown RBP29.61■■■□□ 2.33
CPNE1-212ENST00000430570 TMEM47Q9BQJ4 181 aa29.61■■■□□ 2.33
CPNE1-212ENST00000430570 GPR25O00155 361 aa29.6■■■□□ 2.33
CPNE1-212ENST00000430570 SEC24BO95487 1268 aa29.6■■■□□ 2.33
CPNE1-212ENST00000430570 TSGA10IPQ3SY00 556 aa29.6■■■□□ 2.33
CPNE1-212ENST00000430570 C8orf34Q49A92 452 aa29.6■■■□□ 2.33
CPNE1-212ENST00000430570 CHST3Q7LGC8 479 aa29.6■■■□□ 2.33
CPNE1-212ENST00000430570 RALYLQ86SE5 291 aaKnown RBP29.6■■■□□ 2.33
CPNE1-212ENST00000430570 EPB41L2O43491 1005 aaKnown RBP29.59■■■□□ 2.33
CPNE1-212ENST00000430570 ANTXR2P58335 489 aa29.59■■■□□ 2.33
CPNE1-212ENST00000430570 IRX3P78415 501 aaPredicted RBP29.59■■■□□ 2.33
CPNE1-212ENST00000430570 CHMP4CQ96CF2 233 aa29.59■■■□□ 2.33
CPNE1-212ENST00000430570 TTC14Q96N46 770 aa29.59■■■□□ 2.33
CPNE1-212ENST00000430570 NUP88Q99567 741 aaPredicted RBP29.59■■■□□ 2.33
CPNE1-212ENST00000430570 CPA4Q9UI42 421 aa29.59■■■□□ 2.33
CPNE1-212ENST00000430570 PNMA3Q9UL41 463 aa29.59■■■□□ 2.33
CPNE1-212ENST00000430570 SYNPO2Q9UMS6 1093 aa29.59■■■□□ 2.33
CPNE1-212ENST00000430570 WDR46O15213 610 aaKnown RBP29.58■■■□□ 2.33
CPNE1-212ENST00000430570 TOP1P11387 765 aaKnown RBP29.58■■■□□ 2.33
CPNE1-212ENST00000430570 ADCK5Q3MIX3 580 aa29.58■■■□□ 2.33
CPNE1-212ENST00000430570 FAM83BQ5T0W9 1011 aa29.58■■■□□ 2.33
CPNE1-212ENST00000430570 SLFN13Q68D06 897 aa29.58■■■□□ 2.33
CPNE1-212ENST00000430570 C17orf99Q6UX52 265 aa29.58■■■□□ 2.33
CPNE1-212ENST00000430570 DGKHQ86XP1 1220 aa29.58■■■□□ 2.33
CPNE1-212ENST00000430570 ENAHQ8N8S7 591 aaPredicted RBP29.58■■■□□ 2.33
CPNE1-212ENST00000430570 GMCL1P1Q8NEA9 526 aa29.58■■■□□ 2.33
CPNE1-212ENST00000430570 TNKSO95271 1327 aa29.57■■■□□ 2.33
CPNE1-212ENST00000430570 POTEEQ6S8J3 1075 aa29.57■■■□□ 2.32
CPNE1-212ENST00000430570 RASGRP2Q7LDG7 609 aa29.57■■■□□ 2.32
CPNE1-212ENST00000430570 ANKS1AQ92625 1134 aa29.57■■■□□ 2.32
CPNE1-212ENST00000430570 SNX14Q9Y5W7 946 aa29.57■■■□□ 2.32
CPNE1-212ENST00000430570 ZKSCAN1P17029 563 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-212ENST00000430570 SEC23AQ15436 765 aa29.56■■■□□ 2.32
CPNE1-212ENST00000430570 CCDC178Q5BJE1 867 aa29.56■■■□□ 2.32
CPNE1-212ENST00000430570 SMCR8Q8TEV9 937 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-212ENST00000430570 ZNF296Q8WUU4 475 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-212ENST00000430570 UBAC1Q9BSL1 405 aa29.56■■■□□ 2.32
CPNE1-212ENST00000430570 TANGO6Q9C0B7 1094 aa29.56■■■□□ 2.32
CPNE1-212ENST00000430570 MTMR7Q9Y216 660 aa29.56■■■□□ 2.32
CPNE1-212ENST00000430570 PEX10O60683 326 aa29.55■■■□□ 2.32
CPNE1-212ENST00000430570 MCCP23508 829 aa29.54■■■□□ 2.32
CPNE1-212ENST00000430570 HERVK_113P62684 666 aa29.54■■■□□ 2.32
CPNE1-212ENST00000430570 NOM1Q5C9Z4 860 aaKnown RBP29.54■■■□□ 2.32
CPNE1-212ENST00000430570 NEK1Q96PY6 1258 aa29.54■■■□□ 2.32
CPNE1-212ENST00000430570 SENP2Q9HC62 589 aa29.54■■■□□ 2.32
CPNE1-212ENST00000430570 FBXO28Q9NVF7 368 aa29.54■■■□□ 2.32
CPNE1-212ENST00000430570 IFIT3O14879 490 aaKnown RBP29.53■■■□□ 2.32
CPNE1-212ENST00000430570 BCRP11274 1271 aa29.53■■■□□ 2.32
CPNE1-212ENST00000430570 GPHNQ9NQX3 736 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-212ENST00000430570 CASP8AP2Q9UKL3 1982 aa29.53■■■□□ 2.32
CPNE1-212ENST00000430570 PRC1O43663 620 aa29.52■■■□□ 2.32
CPNE1-212ENST00000430570 COG2Q14746 738 aa29.52■■■□□ 2.32
CPNE1-212ENST00000430570 ANKRD13CQ8N6S4 541 aa29.52■■■□□ 2.32
CPNE1-212ENST00000430570 IGDCC4Q8TDY8 1250 aa29.52■■■□□ 2.32
CPNE1-212ENST00000430570 RLFQ13129 1914 aa29.52■■■□□ 2.32
CPNE1-212ENST00000430570 SPDYE16A6NNV3 312 aaPredicted RBP29.51■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms