RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 TSPYL5Q86VY4 417 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 ASPNQ9BXN1 380 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 EHMT1Q9H9B1 1298 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 DUSP13Q9UII6 198 aa8.38□□□□□ -1.07
HMGB3P5-201ENST00000428894 DNAJC25-GNG10A0A024R161 153 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 RAG1P15918 1043 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 MCM4P33991 863 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 ZNF76P36508 570 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 RALGPS1Q5JS13 557 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 NKD1Q969G9 470 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 GMIPQ9P107 970 aa8.37□□□□□ -1.07
HMGB3P5-201ENST00000428894 ZNF503-AS2A6NEH8 195 aa8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 C8AP07357 584 aa8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 CLCQ05315 142 aa8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 TMEM67Q5HYA8 995 aa8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 ZNF648Q5T619 568 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 VWCEQ96DN2 955 aa8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
HMGB3P5-201ENST00000428894 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 FARP2O94887 1054 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 UBOX5O94941 541 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 GLI1P08151 1106 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 ZNF165P49910 485 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 HK2P52789 917 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 EGR3Q06889 387 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 OVOS1Q6IE37 1185 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 KIAA0825Q8IV33 1275 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 LIN37Q96GY3 246 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 EAF1Q96JC9 268 aaPredicted RBP8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 SPON2Q9BUD6 331 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 FAM53CQ9NYF3 392 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 TMEM59LQ9UK28 342 aa8.35□□□□□ -1.07
HMGB3P5-201ENST00000428894 RBM47A0AV96 593 aaKnown RBP8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 RAC2P15153 192 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 LTKP29376 864 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 MLANAQ16655 118 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 CLEC16AQ2KHT3 1053 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 CDCP2Q5VXM1 449 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 SLITRK4Q8IW52 837 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
HMGB3P5-201ENST00000428894 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 POLR2BP30876 1174 aaKnown RBP8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 ASCC2Q9H1I8 757 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 PCDHA11Q9Y5I1 949 aa8.33□□□□□ -1.08
HMGB3P5-201ENST00000428894 ERVFC1P60507 584 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 RNF4P78317 190 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 FANCCQ00597 558 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 MPZL3Q6UWV2 235 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 NLRC3Q7RTR2 1065 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 ABHD4Q8TB40 342 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
HMGB3P5-201ENST00000428894 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
HMGB3P5-201ENST00000428894 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
HMGB3P5-201ENST00000428894 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P5-201ENST00000428894 MYLIPQ8WY64 445 aa8.31□□□□□ -1.08
HMGB3P5-201ENST00000428894 RNF34Q969K3 372 aa8.31□□□□□ -1.08
HMGB3P5-201ENST00000428894 DCAF1Q9Y4B6 1507 aa8.3□□□□□ -1.08
HMGB3P5-201ENST00000428894 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P5-201ENST00000428894 KSR1Q8IVT5 923 aa8.3□□□□□ -1.08
HMGB3P5-201ENST00000428894 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P5-201ENST00000428894 PCDHGB7Q9Y5F8 929 aa8.3□□□□□ -1.08
HMGB3P5-201ENST00000428894 HPXP02790 462 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 ZGLP1P0C6A0 271 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 CCNFP41002 786 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 MESP2Q0VG99 397 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 ZNF124Q15973 351 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 NBPF9Q3BBW0 867 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 PRR23BQ6ZRT6 265 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 ENOX1Q8TC92 643 aaKnown RBP8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 DHX38Q92620 1227 aaKnown RBP8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 FAM84AQ96KN4 292 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 SLC38A3Q99624 504 aa8.29□□□□□ -1.08
HMGB3P5-201ENST00000428894 CLEC3AO75596 197 aa8.28□□□□□ -1.08
HMGB3P5-201ENST00000428894 PDZD8Q8NEN9 1154 aa8.28□□□□□ -1.08
HMGB3P5-201ENST00000428894 SYTL5Q8TDW5 730 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P5-201ENST00000428894 ZNF512BQ96KM6 892 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P5-201ENST00000428894 MEIS3P2A8K0S8 358 aa8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 TRHRP34981 398 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 TEKQ02763 1124 aa8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 SNW1Q13573 536 aaKnown RBP8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 PKN1Q16512 942 aa8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 TMC3Q7Z5M5 1100 aa8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 OXR1Q8N573 874 aa8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 HDAC8Q9BY41 377 aa8.27□□□□□ -1.09
HMGB3P5-201ENST00000428894 SCRIBQ14160 1630 aa8.26□□□□□ -1.09
HMGB3P5-201ENST00000428894 TNFRSF10CO14798 259 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms