RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 UBN2Q6ZU65 1347 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 ATRNO75882 1429 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 TDO2P48775 406 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 NNTQ13423 1086 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 STIM1Q13586 685 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 GLE1Q53GS7 698 aaKnown RBP5.79□□□□□ -1.48
RIF1-203ENST00000428287 ARHGAP27Q6ZUM4 889 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 FSD1Q9BTV5 496 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 LACRTQ9GZZ8 138 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 VCPKMTQ9H867 229 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 KLC4Q9NSK0 619 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 CHD5Q8TDI0 1954 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 BPTFQ12830 3046 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 NDUFAB1O14561 156 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 ACTN4O43707 911 aaKnown RBP5.79□□□□□ -1.48
RIF1-203ENST00000428287 GGCXP38435 758 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 APBA1Q02410 837 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 ICA1Q05084 483 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 STK3Q13188 491 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 CHP1Q99653 195 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 JPH2Q9BR39 696 aaPredicted RBP5.79□□□□□ -1.48
RIF1-203ENST00000428287 PA2G4Q9UQ80 394 aaKnown RBP5.79□□□□□ -1.48
RIF1-203ENST00000428287 ADAMTSL3P82987 1691 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 ARID2Q68CP9 1835 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 TEX33O43247 280 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 G3BP1Q13283 466 aaKnown RBP eCLIP5.79□□□□□ -1.488e-6■■■■□ 20.2
RIF1-203ENST00000428287 ZNF268Q14587 947 aaPredicted RBP5.79□□□□□ -1.48
RIF1-203ENST00000428287 CCDC170Q8IYT3 715 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 SPATA4Q8NEY3 305 aa5.79□□□□□ -1.48
RIF1-203ENST00000428287 TLR7Q9NYK1 1049 aaKnown RBP5.79□□□□□ -1.48
RIF1-203ENST00000428287 C5orf60A6NFR6 353 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 MGRN1O60291 552 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 MYBL2P10244 700 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 SPAG1Q07617 926 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ARMC9Q7Z3E5 817 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CCDC13Q8IYE1 715 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ARMC2Q8NEN0 867 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 EPN3Q9H201 632 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 EHD4Q9H223 541 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ZSWIM4Q9H7M6 989 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 LZTFL1Q9NQ48 299 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 BHMG1C9JSJ3 638 aaPredicted RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 GCFC2P16383 781 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 IFNAR1P17181 557 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 KRT9P35527 623 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ERVK-24P63145 666 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CCDC50Q8IVM0 306 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CCDC102AQ96A19 550 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CCT8L2Q96SF2 557 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CDC5LQ99459 802 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 A0A1B0GUA9 196 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 RNF225M0QZC1 329 aaPredicted RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 TOB1P50616 345 aaPredicted RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 PDIA6Q15084 440 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 OLFM4Q6UX06 510 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 KRI1Q8N9T8 703 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 RETREG2Q8NC44 543 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 TCP11Q8WWU5 503 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ANKRD27Q96NW4 1050 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 SIL1Q9H173 461 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 RBM28Q9NW13 759 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 DDX20Q9UHI6 824 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 DACH1Q9UI36 760 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 MAN1B1Q9UKM7 699 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 DISP2A7MBM2 1401 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 DOCK5Q9H7D0 1870 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 NCKAP5LQ9HCH0 1330 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ZNF569Q5MCW4 686 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 NAA35Q5VZE5 725 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CCDC26Q8TAB7 109 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 RNF217Q8TC41 542 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 SELENOOQ9BVL4 669 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 RNF14Q9UBS8 474 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 SRPRBQ9Y5M8 271 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 CASP7P55210 303 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 TTLL7Q6ZT98 887 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 EHBP1Q8NDI1 1231 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 SAMSN1Q9NSI8 373 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 SNX12Q9UMY4 172 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 ALADP13716 330 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 RCAN1P53805 252 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 CKAP4Q07065 602 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 TPRNQ4KMQ1 711 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 GJB4Q9NTQ9 266 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 LIMA1Q9UHB6 759 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 PUF60Q9UHX1 559 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 DNM1LO00429 736 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 POLR2DO15514 142 aaKnown RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 FGAP02671 866 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 RILPL1Q5EBL4 403 aa5.78□□□□□ -1.48
RIF1-203ENST00000428287 FOXP1Q9H334 677 aaPredicted RBP5.78□□□□□ -1.48
RIF1-203ENST00000428287 A0A0U1RQJ8 604 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 KRT14P02533 472 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 ZFYP08048 801 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 CCT2P78371 535 aaKnown RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 GCKRQ14397 625 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 LACTB2Q53H82 288 aaPredicted RBP5.77□□□□□ -1.49
RIF1-203ENST00000428287 ATRIPQ8WXE1 791 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 SEC14L1Q92503 715 aa5.77□□□□□ -1.49
RIF1-203ENST00000428287 ANK1P16157 1881 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms