RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 TMEM67Q5HYA8 995 aa28.27■■■□□ 2.12
APOE-202ENST00000425718 RUFY3Q7L099 469 aa28.27■■■□□ 2.12
APOE-202ENST00000425718 CCDC84Q86UT8 332 aaPredicted RBP28.27■■■□□ 2.12
APOE-202ENST00000425718 ENAHQ8N8S7 591 aaPredicted RBP28.27■■■□□ 2.12
APOE-202ENST00000425718 GMCL1P1Q8NEA9 526 aa28.27■■■□□ 2.12
APOE-202ENST00000425718 ZCCHC17Q9NP64 241 aaKnown RBP28.27■■■□□ 2.12
APOE-202ENST00000425718 THSD7BQ9C0I4 1608 aa28.27■■■□□ 2.12
APOE-202ENST00000425718 TESPA1A2RU30 521 aaPredicted RBP28.26■■■□□ 2.11
APOE-202ENST00000425718 RPS6KB1P23443 525 aa28.26■■■□□ 2.11
APOE-202ENST00000425718 LIFRP42702 1097 aa28.26■■■□□ 2.11
APOE-202ENST00000425718 GRM1Q13255 1194 aa28.26■■■□□ 2.11
APOE-202ENST00000425718 ACER1Q8TDN7 264 aa28.26■■■□□ 2.11
APOE-202ENST00000425718 MS4A4AQ96JQ5 239 aa28.26■■■□□ 2.11
APOE-202ENST00000425718 ZKSCAN3Q9BRR0 538 aa28.26■■■□□ 2.11
APOE-202ENST00000425718 CCL15-CCL14A0A0B4J2E2 113 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 NMT2O60551 498 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 VEGFBP49765 207 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 HMGCS2P54868 508 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 EXOSC10Q01780 885 aaKnown RBP28.25■■■□□ 2.11
APOE-202ENST00000425718 MKRN3Q13064 507 aaKnown RBP28.25■■■□□ 2.11
APOE-202ENST00000425718 SEC23AQ15436 765 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 CCL15Q16663 113 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 SIAH1Q8IUQ4 282 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 FBXL16Q8N461 479 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 TBC1D32Q96NH3 1257 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 SLC45A1Q9Y2W3 748 aa28.25■■■□□ 2.11
APOE-202ENST00000425718 A0A1W2PRG0 241 aa28.24■■■□□ 2.11
APOE-202ENST00000425718 ANTXR2P58335 489 aa28.24■■■□□ 2.11
APOE-202ENST00000425718 CLEC10AQ8IUN9 316 aa28.24■■■□□ 2.11
APOE-202ENST00000425718 IGDCC4Q8TDY8 1250 aa28.24■■■□□ 2.11
APOE-202ENST00000425718 TMEM47Q9BQJ4 181 aa28.24■■■□□ 2.11
APOE-202ENST00000425718 WDR46O15213 610 aaKnown RBP28.23■■■□□ 2.11
APOE-202ENST00000425718 ALDH1A1P00352 501 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 TM4SF4P48230 202 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 HTRA3P83110 453 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 RCSD1Q6JBY9 416 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 GADL1Q6ZQY3 521 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 PNMA3Q9UL41 463 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 AGTPBP1Q9UPW5 1226 aa28.23■■■□□ 2.11
APOE-202ENST00000425718 CCDC69A6NI79 296 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 F5H6K3 240 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 SH2B2O14492 632 aaPredicted RBP28.22■■■□□ 2.11
APOE-202ENST00000425718 KIF23Q02241 960 aaPredicted RBP28.22■■■□□ 2.11
APOE-202ENST00000425718 KLRC3Q07444 240 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 SYNE3Q6ZMZ3 975 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 ANKRD23Q86SG2 305 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 PNMA1Q8ND90 353 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 DCAF4Q8WV16 495 aa28.22■■■□□ 2.11
APOE-202ENST00000425718 ANKRD1Q15327 319 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 ZYXQ15942 572 aaKnown RBP28.21■■■□□ 2.11
APOE-202ENST00000425718 NFXL1Q6ZNB6 911 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 CHST3Q7LGC8 479 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 CATIPQ7Z7H3 387 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 SGMS1Q86VZ5 419 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 LRRC47Q8N1G4 583 aaKnown RBP28.21■■■□□ 2.11
APOE-202ENST00000425718 GMCL1Q96IK5 515 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 EMILIN3Q9NT22 766 aa28.21■■■□□ 2.11
APOE-202ENST00000425718 RAD21O60216 631 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 CALM1P0DP23 149 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 CALM2P0DP24 149 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 CALM3P0DP25 149 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 RABEP1Q15276 862 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 SLFN13Q68D06 897 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 BRI3BPQ8WY22 251 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 ALDH8A1Q9H2A2 487 aaPredicted RBP28.2■■■□□ 2.1
APOE-202ENST00000425718 LY9Q9HBG7 655 aa28.2■■■□□ 2.1
APOE-202ENST00000425718 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 OSBPP22059 807 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 HOXA7P31268 230 aaPredicted RBP28.19■■■□□ 2.1
APOE-202ENST00000425718 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 NKX2-3Q8TAU0 364 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 MAP3K14Q99558 947 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 PDRG1Q9NUG6 133 aa28.19■■■□□ 2.1
APOE-202ENST00000425718 DDAH1O94760 285 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 NDUFB10O96000 172 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 VCAM1P19320 739 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 SLC1A4P43007 532 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 RCAN1P53805 252 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 Q6ZUG5 572 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 AGXT2Q9BYV1 514 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 SLC12A7Q9Y666 1083 aa28.18■■■□□ 2.1
APOE-202ENST00000425718 AOC2O75106 756 aa28.17■■■□□ 2.1
APOE-202ENST00000425718 MAP2K1Q02750 393 aaPredicted RBP28.17■■■□□ 2.1
APOE-202ENST00000425718 GPATCH4Q5T3I0 446 aaKnown RBP28.17■■■□□ 2.1
APOE-202ENST00000425718 IFNL1Q8IU54 200 aa28.17■■■□□ 2.1
APOE-202ENST00000425718 GTF3C2Q8WUA4 911 aaPredicted RBP28.17■■■□□ 2.1
APOE-202ENST00000425718 UPF3BQ9BZI7 483 aaKnown RBP28.17■■■□□ 2.1
APOE-202ENST00000425718 BMP3P12645 472 aa28.16■■■□□ 2.1
APOE-202ENST00000425718 IRX3P78415 501 aaPredicted RBP28.16■■■□□ 2.1
APOE-202ENST00000425718 MOGSQ13724 837 aa28.16■■■□□ 2.1
APOE-202ENST00000425718 ASPRV1Q53RT3 343 aa28.16■■■□□ 2.1
APOE-202ENST00000425718 PARK7Q99497 189 aaKnown RBP28.16■■■□□ 2.1
APOE-202ENST00000425718 MYPNQ86TC9 1320 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms