RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 ZSCAN5CA6NGD5 496 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 HPDP32754 393 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 LACRTQ9GZZ8 138 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 PPANQ9NQ55 473 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 KLC4Q9NSK0 619 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 TTF2Q9UNY4 1162 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 CTNND2Q9UQB3 1225 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 ROBO1Q9Y6N7 1651 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 A0A087X0B3 334 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 TOM1O60784 492 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 NEDD9Q14511 834 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 FAM43BQ6ZT52 329 aaPredicted RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 JMYQ8N9B5 988 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
SEC61A1-202ENST00000424880 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 RNASE9P60153 205 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 MORC3Q14149 939 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 CABLES1Q8TDN4 633 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 RNPC3Q96LT9 517 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 MEFVO15553 781 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 UPP2O95045 317 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 METAP2P50579 478 aaKnown RBP eCLIP12.68□□□□□ -0.383e-7■■■■□ 19.7
SEC61A1-202ENST00000424880 NAA25Q14CX7 972 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 DDX20Q9UHI6 824 aaKnown RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 EPN1Q9Y6I3 576 aaPredicted RBP12.68□□□□□ -0.38
SEC61A1-202ENST00000424880 ERCC3P19447 782 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 CEP85LQ5SZL2 805 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 NFXL1Q6ZNB6 911 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 CCDC13Q8IYE1 715 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 CSRNP2Q9H175 543 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 VIPAS39Q9H9C1 493 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 NDUFA10O95299 355 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 IDEP14735 1019 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 GUCY2FP51841 1108 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 RUFY1Q96T51 708 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 PUS7LQ9H0K6 701 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 FOXP2O15409 715 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 TUBBP07437 444 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 PLCD1P51178 756 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 CLNS1AP54105 237 aaKnown RBP12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 KRT31Q15323 416 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 CCDC40Q4G0X9 1142 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 LMBR1LQ6UX01 489 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
SEC61A1-202ENST00000424880 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 PPP6R2O75170 966 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 IFIT1P09914 478 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 MYBL1P10243 752 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 NNTQ13423 1086 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 GCKRQ14397 625 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 TRADDQ15628 312 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CNGA4Q8IV77 575 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 MCM8Q9UJA3 840 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 B4E1Z4 1266 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 E7EVH7 732 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 UBXN1Q04323 297 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 TRIM29Q14134 588 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 IMMTQ16891 758 aaKnown RBP12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 FILIP1LQ4L180 1135 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 KRT26Q7Z3Y9 468 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 HAUS2Q9NVX0 235 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms