RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 LBX2Q6XYB7 198 aa21.31■■□□□ 1
SBDSP1-202ENST00000423945 GPRC5AQ8NFJ5 357 aa21.31■■□□□ 1
SBDSP1-202ENST00000423945 PORCNQ9H237 461 aa21.31■■□□□ 1
SBDSP1-202ENST00000423945 HELLSQ9NRZ9 838 aa21.31■■□□□ 1
SBDSP1-202ENST00000423945 GJD2Q9UKL4 321 aa21.31■■□□□ 1
SBDSP1-202ENST00000423945 PRDM1O75626 825 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 GTF3C2Q8WUA4 911 aaPredicted RBP21.3■■□□□ 1
SBDSP1-202ENST00000423945 COA7Q96BR5 231 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 PAGR1Q9BTK6 254 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 VCPKMTQ9H867 229 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 KANSL2Q9H9L4 492 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 ARHGEF10LQ9HCE6 1279 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 TACC3Q9Y6A5 838 aa21.3■■□□□ 1
SBDSP1-202ENST00000423945 MYH4Q9Y623 1939 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 IGKV6D-41A0A0C4DH26 115 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 TRIM6-TRIM34B2RNG4 842 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 ELNP15502 786 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 EN2P19622 333 aaPredicted RBP21.29■■□□□ 1
SBDSP1-202ENST00000423945 PPARAQ07869 468 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 NMIQ13287 307 aaPredicted RBP21.29■■□□□ 1
SBDSP1-202ENST00000423945 TICAM2Q86XR7 235 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 RILPL2Q969X0 211 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 NAPBQ9H115 298 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 MKNK2Q9HBH9 465 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 BTBD7Q9P203 1132 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 RABGAP1Q9Y3P9 1069 aa21.29■■□□□ 1
SBDSP1-202ENST00000423945 ADCY3O60266 1144 aa21.28■■□□□ 1
SBDSP1-202ENST00000423945 ZNF589Q86UQ0 364 aaPredicted RBP21.28■■□□□ 1
SBDSP1-202ENST00000423945 SPICE1Q8N0Z3 855 aa21.28■■□□□ 1
SBDSP1-202ENST00000423945 SLAIN1Q8ND83 568 aa21.28■■□□□ 1
SBDSP1-202ENST00000423945 NACAP1Q9BZK3 213 aa21.28■■□□□ 1
SBDSP1-202ENST00000423945 MCMDC2Q4G0Z9 681 aa21.27■■□□□ 1
SBDSP1-202ENST00000423945 PXYLP1Q8TE99 480 aa21.27■■□□□ 1
SBDSP1-202ENST00000423945 LPAR1Q92633 364 aa21.27■■□□□ 1
SBDSP1-202ENST00000423945 TMEM106CQ9BVX2 250 aa21.27■■□□□ 1
SBDSP1-202ENST00000423945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.27■■□□□ 1
SBDSP1-202ENST00000423945 SDSP20132 328 aa21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 ATP2B2Q01814 1243 aa21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 COG2Q14746 738 aa21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 SH2D4AQ9H788 454 aa21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 INCENPQ9NQS7 918 aa21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 NYAP2Q9P242 653 aa21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 COL11A1P12107 1806 aaPredicted RBP21.26■□□□□ 0.99
SBDSP1-202ENST00000423945 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 WDR46O15213 610 aaKnown RBP21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 CCL5P13501 91 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 MAPK4P31152 587 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 DSG3P32926 999 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 CTDSPL2Q05D32 466 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 ALX1Q15699 326 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 GPR142Q7Z601 462 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 USP6NLQ92738 828 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 TANGO6Q9C0B7 1094 aa21.25■□□□□ 0.99
SBDSP1-202ENST00000423945 INHAP05111 366 aa21.24■□□□□ 0.99
SBDSP1-202ENST00000423945 ZNF444Q8N0Y2 327 aaPredicted RBP21.24■□□□□ 0.99
SBDSP1-202ENST00000423945 SHISA4Q96DD7 197 aa21.24■□□□□ 0.99
SBDSP1-202ENST00000423945 UNC93B1Q9H1C4 597 aa21.24■□□□□ 0.99
SBDSP1-202ENST00000423945 ANAPC4Q9UJX5 808 aa21.24■□□□□ 0.99
SBDSP1-202ENST00000423945 FGAP02671 866 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 HSPD1P10809 573 aaKnown RBP21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 FAM47AQ5JRC9 791 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 MORN1Q5T089 497 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 PLEKHH3Q7Z736 793 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 NEDD1Q8NHV4 660 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 ATG4CQ96DT6 458 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 CEP95Q96GE4 821 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 ZNF287Q9HBT7 754 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 FBXO28Q9NVF7 368 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 HOXC10Q9NYD6 342 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 BIN2Q9UBW5 565 aaPredicted RBP21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 CCDC171Q6TFL3 1326 aa21.23■□□□□ 0.99
SBDSP1-202ENST00000423945 UBXN2AP68543 259 aa21.22■□□□□ 0.99
SBDSP1-202ENST00000423945 PDE4BQ07343 736 aa21.22■□□□□ 0.99
SBDSP1-202ENST00000423945 TRIM32Q13049 653 aa21.22■□□□□ 0.99
SBDSP1-202ENST00000423945 TRIB2Q92519 343 aa21.22■□□□□ 0.99
SBDSP1-202ENST00000423945 MTMR4Q9NYA4 1195 aa21.22■□□□□ 0.99
SBDSP1-202ENST00000423945 CLIP2Q9UDT6 1046 aa21.22■□□□□ 0.99
SBDSP1-202ENST00000423945 FLOT1O75955 427 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 CYP2B6P20813 491 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 TFAP4Q01664 338 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 FAM83BQ5T0W9 1011 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 MKL1Q969V6 931 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 NUP88Q99567 741 aaPredicted RBP21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 NUDT12Q9BQG2 462 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 MOV10L1Q9BXT6 1211 aaKnown RBP21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 NBPF3Q9H094 633 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 RNF208Q9H0X6 261 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 GOPCQ9HD26 462 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 ADAMTS5Q9UNA0 930 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 ZMYM6O95789 1325 aa21.21■□□□□ 0.99
SBDSP1-202ENST00000423945 F5H6K3 240 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 GJB1P08034 283 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 SLC3A2P08195 630 aaKnown RBP21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 FGRP09769 529 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 TSPY3P0CV98 308 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 TSPY8P0CW00 308 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 CCNA1P78396 465 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 KLRC3Q07444 240 aa21.2■□□□□ 0.98
SBDSP1-202ENST00000423945 TTC22Q5TAA0 569 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms