RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PRKCZQ05513 592 aa31.39■■■□□ 2.62
CDK9-202ENST00000421939 SLC9C1Q4G0N8 1177 aa31.39■■■□□ 2.62
CDK9-202ENST00000421939 IGKV6D-41A0A0C4DH26 115 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 FGAP02671 866 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 CTDSPL2Q05D32 466 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 CENPQQ7L2Z9 268 aaPredicted RBP31.38■■■□□ 2.61
CDK9-202ENST00000421939 SPICE1Q8N0Z3 855 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 GPRC5AQ8NFJ5 357 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 PAGR1Q9BTK6 254 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 TANGO6Q9C0B7 1094 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 RBPJLQ9UBG7 517 aa31.38■■■□□ 2.61
CDK9-202ENST00000421939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.38■■■□□ 2.61
CDK9-202ENST00000421939 PEX10O60683 326 aa31.37■■■□□ 2.61
CDK9-202ENST00000421939 SOX10P56693 466 aa31.37■■■□□ 2.61
CDK9-202ENST00000421939 RAET1EQ8TD07 263 aa31.37■■■□□ 2.61
CDK9-202ENST00000421939 GOPCQ9HD26 462 aa31.37■■■□□ 2.61
CDK9-202ENST00000421939 NYAP2Q9P242 653 aa31.37■■■□□ 2.61
CDK9-202ENST00000421939 TSPY3P0CV98 308 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 TSPY8P0CW00 308 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 ERVK-9P63128 1117 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 ERVK-24P63145 666 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 POTEEQ6S8J3 1075 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 LBX2Q6XYB7 198 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 COA7Q96BR5 231 aa31.36■■■□□ 2.61
CDK9-202ENST00000421939 SPDYE16A6NNV3 312 aaPredicted RBP31.35■■■□□ 2.61
CDK9-202ENST00000421939 WDR46O15213 610 aaKnown RBP31.35■■■□□ 2.61
CDK9-202ENST00000421939 NEDD1Q8NHV4 660 aa31.35■■■□□ 2.61
CDK9-202ENST00000421939 CEP95Q96GE4 821 aa31.35■■■□□ 2.61
CDK9-202ENST00000421939 GABRQQ9UN88 632 aa31.35■■■□□ 2.61
CDK9-202ENST00000421939 RABGAP1Q9Y3P9 1069 aa31.35■■■□□ 2.61
CDK9-202ENST00000421939 TFAP4Q01664 338 aa31.34■■■□□ 2.61
CDK9-202ENST00000421939 FAM47AQ5JRC9 791 aa31.34■■■□□ 2.61
CDK9-202ENST00000421939 NBPF11Q86T75 865 aa31.34■■■□□ 2.61
CDK9-202ENST00000421939 ZNF333Q96JL9 665 aa31.34■■■□□ 2.61
CDK9-202ENST00000421939 FLT3LGP49771 235 aa31.33■■■□□ 2.61
CDK9-202ENST00000421939 SH3TC2Q8TF17 1288 aa31.33■■■□□ 2.61
CDK9-202ENST00000421939 MTMR4Q9NYA4 1195 aa31.33■■■□□ 2.61
CDK9-202ENST00000421939 RAD21O60216 631 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 CNMDO75829 334 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 COG2Q14746 738 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 INCENPQ9NQS7 918 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 TACC3Q9Y6A5 838 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 A0A0G2JMZ2 1700 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 RLFQ13129 1914 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 MYH4Q9Y623 1939 aa31.32■■■□□ 2.6
CDK9-202ENST00000421939 ORC4O43929 436 aa31.31■■■□□ 2.6
CDK9-202ENST00000421939 TTLL1O95922 423 aa31.31■■■□□ 2.6
CDK9-202ENST00000421939 Q3C1V9 767 aa31.31■■■□□ 2.6
CDK9-202ENST00000421939 HOXC10Q9NYD6 342 aa31.31■■■□□ 2.6
CDK9-202ENST00000421939 CLIP2Q9UDT6 1046 aa31.31■■■□□ 2.6
CDK9-202ENST00000421939 DOCK3Q8IZD9 2030 aa31.31■■■□□ 2.6
CDK9-202ENST00000421939 RAD50Q92878 1312 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 TSPY2A6NKD2 308 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 FLOT1O75955 427 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 FGRP09769 529 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 MAPK4P31152 587 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 GRK4P32298 578 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 HAND2P61296 217 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 SYNPO2Q9UMS6 1093 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 LAMA4Q16363 1823 aa31.3■■■□□ 2.6
CDK9-202ENST00000421939 RGS19P49795 217 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 CCNA1P78396 465 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 IRF5Q13568 498 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 CCAR1Q8IX12 1150 aaKnown RBP31.29■■■□□ 2.6
CDK9-202ENST00000421939 SLAIN1Q8ND83 568 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 DSCC1Q9BVC3 393 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 PORCNQ9H237 461 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 IL25Q9H293 177 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 BTBD7Q9P203 1132 aa31.29■■■□□ 2.6
CDK9-202ENST00000421939 PARP14Q460N5 1801 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 RANBP6O60518 1105 aaKnown RBP31.28■■■□□ 2.6
CDK9-202ENST00000421939 NDUFB10O96000 172 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 NEFLP07196 543 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 DSG3P32926 999 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 FAM83BQ5T0W9 1011 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 MKL1Q969V6 931 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 TOMM22Q9NS69 142 aa31.28■■■□□ 2.6
CDK9-202ENST00000421939 F5H6K3 240 aa31.27■■■□□ 2.6
CDK9-202ENST00000421939 CHMLP26374 656 aa31.27■■■□□ 2.6
CDK9-202ENST00000421939 KLRC3Q07444 240 aa31.27■■■□□ 2.6
CDK9-202ENST00000421939 PPP4R3BQ5MIZ7 849 aa31.27■■■□□ 2.6
CDK9-202ENST00000421939 LRRC47Q8N1G4 583 aaKnown RBP31.27■■■□□ 2.6
CDK9-202ENST00000421939 NBPF3Q9H094 633 aa31.27■■■□□ 2.6
CDK9-202ENST00000421939 RBBP6Q7Z6E9 1792 aaKnown RBP31.26■■■□□ 2.59
CDK9-202ENST00000421939 ADCY3O60266 1144 aa31.26■■■□□ 2.59
CDK9-202ENST00000421939 PCP11498 1178 aaKnown RBP31.26■■■□□ 2.59
CDK9-202ENST00000421939 RRP12Q5JTH9 1297 aaKnown RBP31.26■■■□□ 2.59
CDK9-202ENST00000421939 TBC1D10CQ8IV04 446 aa31.26■■■□□ 2.59
CDK9-202ENST00000421939 MB21D1Q8N884 522 aa31.26■■■□□ 2.59
CDK9-202ENST00000421939 RUFY2Q8WXA3 655 aa31.26■■■□□ 2.59
CDK9-202ENST00000421939 ATG4CQ96DT6 458 aa31.26■■■□□ 2.59
CDK9-202ENST00000421939 BRCA2P51587 3418 aa31.26■■■□□ 2.59
CDK9-202ENST00000421939 AKNAD1Q5T1N1 836 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 SAMD1Q6SPF0 538 aaPredicted RBP31.25■■■□□ 2.59
CDK9-202ENST00000421939 GPR142Q7Z601 462 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 GMCL1P1Q8NEA9 526 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 PXYLP1Q8TE99 480 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 STAG1Q8WVM7 1258 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 SOCS4Q8WXH5 440 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 CCDC136Q96JN2 1154 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms