RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 TMX2Q9Y320 296 aa25.44■■□□□ 1.66
CPNE1-211ENST00000420363 LAMA4Q16363 1823 aa25.44■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L15C9J2P7 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L13C9JLJ4 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L11C9JVI0 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L18D6R9N7 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L22D6RA61 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L17D6RBQ6 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L19D6RCP7 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L20D6RJB6 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 HSPD1P10809 573 aaKnown RBP25.43■■□□□ 1.66
CPNE1-211ENST00000420363 CCL5P13501 91 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 HERVK_113P62684 666 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 USP17L24Q0WX57 530 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 MORF4L1Q9UBU8 362 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 GABRQQ9UN88 632 aa25.43■■□□□ 1.66
CPNE1-211ENST00000420363 GJB1P08034 283 aa25.42■■□□□ 1.66
CPNE1-211ENST00000420363 CLEC10AQ8IUN9 316 aa25.42■■□□□ 1.66
CPNE1-211ENST00000420363 SIAH1Q8IUQ4 282 aa25.42■■□□□ 1.66
CPNE1-211ENST00000420363 ANKRD13CQ8N6S4 541 aa25.42■■□□□ 1.66
CPNE1-211ENST00000420363 SLAIN1Q8ND83 568 aa25.42■■□□□ 1.66
CPNE1-211ENST00000420363 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.42■■□□□ 1.66
CPNE1-211ENST00000420363 A0A0G2JMZ2 1700 aa25.42■■□□□ 1.66
CPNE1-211ENST00000420363 GJA8P48165 433 aa25.41■■□□□ 1.66
CPNE1-211ENST00000420363 LBX2Q6XYB7 198 aa25.41■■□□□ 1.66
CPNE1-211ENST00000420363 CATSPERGQ6ZRH7 1159 aa25.41■■□□□ 1.66
CPNE1-211ENST00000420363 DPF3Q92784 378 aa25.41■■□□□ 1.66
CPNE1-211ENST00000420363 P2RX7Q99572 595 aaKnown RBP25.41■■□□□ 1.66
CPNE1-211ENST00000420363 VCPKMTQ9H867 229 aa25.41■■□□□ 1.66
CPNE1-211ENST00000420363 RAD50Q92878 1312 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 PARP14Q460N5 1801 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 MYH4Q9Y623 1939 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 IGKV6D-41A0A0C4DH26 115 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 H0YGN5 161 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 TNPO2O14787 897 aaKnown RBP25.4■■□□□ 1.66
CPNE1-211ENST00000420363 ADCY3O60266 1144 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 EEF2P13639 858 aaKnown RBP25.4■■□□□ 1.66
CPNE1-211ENST00000420363 CWC27Q6UX04 472 aaKnown RBP25.4■■□□□ 1.66
CPNE1-211ENST00000420363 ZNF444Q8N0Y2 327 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-211ENST00000420363 SHISA4Q96DD7 197 aa25.4■■□□□ 1.66
CPNE1-211ENST00000420363 COLQQ9Y215 455 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-211ENST00000420363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.4■■□□□ 1.66
CPNE1-211ENST00000420363 FGAP02671 866 aa25.39■■□□□ 1.66
CPNE1-211ENST00000420363 FLT3LGP49771 235 aa25.39■■□□□ 1.66
CPNE1-211ENST00000420363 RPAP3Q9H6T3 665 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-211ENST00000420363 NYAP2Q9P242 653 aa25.39■■□□□ 1.66
CPNE1-211ENST00000420363 SYNPO2Q9UMS6 1093 aa25.39■■□□□ 1.66
CPNE1-211ENST00000420363 RLFQ13129 1914 aa25.39■■□□□ 1.65
CPNE1-211ENST00000420363 WDR46O15213 610 aaKnown RBP25.38■■□□□ 1.65
CPNE1-211ENST00000420363 PRDM1O75626 825 aa25.38■■□□□ 1.65
CPNE1-211ENST00000420363 STK11IPQ8N1F8 1099 aa25.38■■□□□ 1.65
CPNE1-211ENST00000420363 GOPCQ9HD26 462 aa25.38■■□□□ 1.65
CPNE1-211ENST00000420363 FGRP09769 529 aa25.37■■□□□ 1.65
CPNE1-211ENST00000420363 PPP4R3BQ5MIZ7 849 aa25.37■■□□□ 1.65
CPNE1-211ENST00000420363 NEDD1Q8NHV4 660 aa25.37■■□□□ 1.65
CPNE1-211ENST00000420363 COA7Q96BR5 231 aa25.37■■□□□ 1.65
CPNE1-211ENST00000420363 ORC4O43929 436 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 NEFLP07196 543 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 TSPY3P0CV98 308 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 TSPY8P0CW00 308 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 PCP11498 1178 aaKnown RBP25.36■■□□□ 1.65
CPNE1-211ENST00000420363 IRF5Q13568 498 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 PXYLP1Q8TE99 480 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 DSCC1Q9BVC3 393 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 UNC93B1Q9H1C4 597 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 RABGAP1Q9Y3P9 1069 aa25.36■■□□□ 1.65
CPNE1-211ENST00000420363 CEP290O15078 2479 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 SPDYE16A6NNV3 312 aaPredicted RBP25.35■■□□□ 1.65
CPNE1-211ENST00000420363 ELNP15502 786 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 ERVK-9P63128 1117 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 ERVK-24P63145 666 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 ATP2B2Q01814 1243 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 CTDSPL2Q05D32 466 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 KIAA1755Q5JYT7 1200 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 GPRC5AQ8NFJ5 357 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 U2AF1L4Q8WU68 220 aaKnown RBP25.35■■□□□ 1.65
CPNE1-211ENST00000420363 HTATIP2Q9BUP3 242 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 TXNRD2Q9NNW7 524 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 MTMR4Q9NYA4 1195 aa25.35■■□□□ 1.65
CPNE1-211ENST00000420363 NT5C2P49902 561 aa25.34■■□□□ 1.65
CPNE1-211ENST00000420363 MKL1Q969V6 931 aa25.34■■□□□ 1.65
CPNE1-211ENST00000420363 CEP95Q96GE4 821 aa25.34■■□□□ 1.65
CPNE1-211ENST00000420363 TANGO6Q9C0B7 1094 aa25.34■■□□□ 1.65
CPNE1-211ENST00000420363 RBPJLQ9UBG7 517 aa25.34■■□□□ 1.65
CPNE1-211ENST00000420363 SGPL1O95470 568 aa25.33■■□□□ 1.65
CPNE1-211ENST00000420363 TTLL1O95922 423 aa25.33■■□□□ 1.65
CPNE1-211ENST00000420363 INHAP05111 366 aa25.33■■□□□ 1.65
CPNE1-211ENST00000420363 CAPN2P17655 700 aa25.33■■□□□ 1.65
CPNE1-211ENST00000420363 FXR1P51114 621 aaKnown RBP eCLIP25.33■■□□□ 1.65
CPNE1-211ENST00000420363 COG2Q14746 738 aa25.33■■□□□ 1.65
CPNE1-211ENST00000420363 RUFY2Q8WXA3 655 aa25.33■■□□□ 1.65
CPNE1-211ENST00000420363 DOCK3Q8IZD9 2030 aa25.32■■□□□ 1.64
CPNE1-211ENST00000420363 CENPBP07199 599 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-211ENST00000420363 TFAP4Q01664 338 aa25.32■■□□□ 1.64
CPNE1-211ENST00000420363 POTEEQ6S8J3 1075 aa25.32■■□□□ 1.64
CPNE1-211ENST00000420363 SPICE1Q8N0Z3 855 aa25.32■■□□□ 1.64
CPNE1-211ENST00000420363 HOXC10Q9NYD6 342 aa25.32■■□□□ 1.64
CPNE1-211ENST00000420363 PLXNB2O15031 1838 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 TSPY2A6NKD2 308 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 CNMDO75829 334 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms