RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 RCOR1Q9UKL0 485 aa15.46■□□□□ 0.07
ZNF3-206ENST00000415068 GJA3Q9Y6H8 435 aa15.46■□□□□ 0.07
ZNF3-206ENST00000415068 MORC2Q9Y6X9 1032 aaPredicted RBP15.46■□□□□ 0.07
ZNF3-206ENST00000415068 V9GY48 417 aaPredicted RBP15.46■□□□□ 0.07
ZNF3-206ENST00000415068 PHF20L1A8MW92 1017 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
ZNF3-206ENST00000415068 PDHBP11177 359 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 CAP2P40123 477 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 PFKFB3Q16875 520 aaPredicted RBP15.45■□□□□ 0.06
ZNF3-206ENST00000415068 KRT40Q6A162 431 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 SAMD7Q7Z3H4 446 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 TEX2Q8IWB9 1127 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 CCDC144CPQ8IYA2 1237 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 ZC3H15Q8WU90 426 aaKnown RBP15.45■□□□□ 0.06
ZNF3-206ENST00000415068 MYH8P13535 1937 aa15.45■□□□□ 0.06
ZNF3-206ENST00000415068 KLRF2D3W0D1 207 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 PLA2G6O60733 806 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 MMP1P03956 469 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 KRT85P78386 507 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 TRIM29Q14134 588 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 C9orf131Q5VYM1 1079 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 MCTP1Q6DN14 999 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 RAB11FIP4Q86YS3 637 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 DCAF4Q8WV16 495 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 MTMR8Q96EF0 704 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 ZNF396Q96N95 335 aaPredicted RBP15.44■□□□□ 0.06
ZNF3-206ENST00000415068 TMEM39BQ9GZU3 492 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 DEFB129Q9H1M3 183 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 ADARB2Q9NS39 739 aaKnown RBP15.44■□□□□ 0.06
ZNF3-206ENST00000415068 HACL1Q9UJ83 578 aa15.44■□□□□ 0.06
ZNF3-206ENST00000415068 CNTNAP5Q8WYK1 1306 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 SHTN1A0MZ66 631 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 hCG_1984214I3L0E3 225 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 TRAK2O60296 914 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 CTNND1O60716 968 aaKnown RBP15.43■□□□□ 0.06
ZNF3-206ENST00000415068 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 EGFRP00533 1210 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 SCG2P13521 617 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 EEF2P13639 858 aaKnown RBP15.43■□□□□ 0.06
ZNF3-206ENST00000415068 KIF23Q02241 960 aaPredicted RBP15.43■□□□□ 0.06
ZNF3-206ENST00000415068 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 RRP1BQ14684 758 aaKnown RBP15.43■□□□□ 0.06
ZNF3-206ENST00000415068 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 BTNL9Q6UXG8 535 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 STAG2Q8N3U4 1231 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 ZNF713Q8N859 430 aaPredicted RBP15.43■□□□□ 0.06
ZNF3-206ENST00000415068 PHF20Q9BVI0 1012 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 VEZTQ9HBM0 779 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 TMX2Q9Y320 296 aa15.43■□□□□ 0.06
ZNF3-206ENST00000415068 CYTH3O43739 400 aa15.42■□□□□ 0.06
ZNF3-206ENST00000415068 ASNSP08243 561 aa15.42■□□□□ 0.06
ZNF3-206ENST00000415068 HIRAP54198 1017 aaPredicted RBP15.42■□□□□ 0.06
ZNF3-206ENST00000415068 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
ZNF3-206ENST00000415068 SEPT2Q15019 361 aa15.42■□□□□ 0.06
ZNF3-206ENST00000415068 SAFBQ15424 915 aaKnown RBP eCLIP15.42■□□□□ 0.06
ZNF3-206ENST00000415068 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
ZNF3-206ENST00000415068 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
ZNF3-206ENST00000415068 RTEL1Q9NZ71 1219 aa15.42■□□□□ 0.06
ZNF3-206ENST00000415068 TCHHQ07283 1943 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 PRPF40AO75400 957 aaKnown RBP15.41■□□□□ 0.06
ZNF3-206ENST00000415068 MBD3O95983 291 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 CALML3P27482 149 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 EPS15P42566 896 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 JAG1P78504 1218 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 SLC35G1Q2M3R5 365 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 USP50Q70EL3 339 aaPredicted RBP15.41■□□□□ 0.06
ZNF3-206ENST00000415068 POLR3EQ9NVU0 708 aa15.41■□□□□ 0.06
ZNF3-206ENST00000415068 GLTPD2A6NH11 291 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 F5H6K3 240 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 MPHOSPH10O00566 681 aaKnown RBP15.4■□□□□ 0.06
ZNF3-206ENST00000415068 DTNBO60941 627 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 DDNO94850 711 aaPredicted RBP15.4■□□□□ 0.06
ZNF3-206ENST00000415068 GH2P01242 217 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 UBE2HP62256 183 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 ICA1Q05084 483 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 KLRC3Q07444 240 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 SUPT20HL1Q3ZLR7 823 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 FOXD4L5Q5VV16 416 aaPredicted RBP15.4■□□□□ 0.06
ZNF3-206ENST00000415068 USP17L2Q6R6M4 530 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 DAGLBQ8NCG7 672 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 FOXD4L4Q8WXT5 416 aaPredicted RBP15.4■□□□□ 0.06
ZNF3-206ENST00000415068 AIFM3Q96NN9 605 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
ZNF3-206ENST00000415068 BARHL2Q9NY43 387 aa15.4■□□□□ 0.06
ZNF3-206ENST00000415068 ESYT2A0FGR8 921 aa15.39■□□□□ 0.05
ZNF3-206ENST00000415068 YEATS4O95619 227 aa15.39■□□□□ 0.05
ZNF3-206ENST00000415068 LMOD1P29536 600 aaPredicted RBP15.39■□□□□ 0.05
ZNF3-206ENST00000415068 NASPP49321 788 aaPredicted RBP15.39■□□□□ 0.05
ZNF3-206ENST00000415068 NPY5RQ15761 445 aa15.39■□□□□ 0.05
ZNF3-206ENST00000415068 GPR162Q16538 588 aa15.39■□□□□ 0.05
ZNF3-206ENST00000415068 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
ZNF3-206ENST00000415068 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
ZNF3-206ENST00000415068 CMTR1Q8N1G2 835 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms