RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SPATA32Q96LK8 384 aa6.1□□□□□ -1.43
HMGB3P23-201ENST00000414981 CARS2Q9HA77 564 aaKnown RBP6.1□□□□□ -1.43
HMGB3P23-201ENST00000414981 LRRN2O75325 713 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 UBOX5O94941 541 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 NME1P15531 152 aaKnown RBP6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 TPP2P29144 1249 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 TXKP42681 527 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 COL9A2Q14055 689 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 GAB4Q2WGN9 574 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 NLRC3Q7RTR2 1065 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 TSPYL5Q86VY4 417 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 FLAD1Q8NFF5 587 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 TMEM40Q8WWA1 233 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 PCDHGB7Q9Y5F8 929 aa6.09□□□□□ -1.43
HMGB3P23-201ENST00000414981 RBAK-RBAKDNI3L0D1 243 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 TNFRSF10CO14798 259 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 PAPLNO95428 1278 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 ESR1P03372 595 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 RNF4P78317 190 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 NBPF12Q5TAG4 269 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 OVOS1Q6IE37 1185 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 RBBP8NLQ8NC74 664 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 PRDM7Q9NQW5 492 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 CTNND2Q9UQB3 1225 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 RNF114Q9Y508 228 aa6.08□□□□□ -1.44
HMGB3P23-201ENST00000414981 GDNFP39905 211 aa6.07□□□□□ -1.44
HMGB3P23-201ENST00000414981 AFMP43652 599 aa6.07□□□□□ -1.44
HMGB3P23-201ENST00000414981 HDLBPQ00341 1268 aaKnown RBP6.07□□□□□ -1.44
HMGB3P23-201ENST00000414981 CREG2Q8IUH2 290 aa6.07□□□□□ -1.44
HMGB3P23-201ENST00000414981 ANTXR1Q9H6X2 564 aa6.07□□□□□ -1.44
HMGB3P23-201ENST00000414981 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P23-201ENST00000414981 WASH4PA8MWX3 477 aa6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 PAK2Q13177 524 aa6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 NT5DC4Q86YG4 428 aa6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 TAB3Q8N5C8 712 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 RASGRP4Q8TDF6 673 aa6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 ASCC2Q9H1I8 757 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P23-201ENST00000414981 CLEC3AO75596 197 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 DHRS1Q96LJ7 313 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 FERD3LQ96RJ6 166 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 SLC9A7Q96T83 725 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 TM9SF2Q99805 663 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 DUSP13Q9UII6 198 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 CARMIL2Q6F5E8 1435 aa6.05□□□□□ -1.44
HMGB3P23-201ENST00000414981 POLR2BP30876 1174 aaKnown RBP6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 SOX9P48436 509 aa6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 CLEC16AQ2KHT3 1053 aa6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 TMEM192Q8IY95 271 aa6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 DAGLBQ8NCG7 672 aa6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 SYTL5Q8TDW5 730 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 TGIF2Q9GZN2 237 aa6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 C19orf73Q9NVV2 129 aa6.04□□□□□ -1.44
HMGB3P23-201ENST00000414981 GJA8P48165 433 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 EGR3Q06889 387 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 NMIQ13287 307 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 C9orf131Q5VYM1 1079 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 TTC6Q86TZ1 520 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 ZNF655Q8N720 491 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 FAM168AQ92567 244 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 GPRASP2Q96D09 838 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 ADAMTS10Q9H324 1103 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 GINM1Q9NU53 330 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 SLAMF8Q9P0V8 285 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 ZNF281Q9Y2X9 895 aa6.03□□□□□ -1.44
HMGB3P23-201ENST00000414981 DNAJC25-GNG10A0A024R161 153 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 SHISA3A0PJX4 238 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 ACRP10323 421 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 ZSWIM9Q86XI8 627 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 USHBP1Q8N6Y0 703 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 DHX38Q92620 1227 aaKnown RBP6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 SYTL4Q96C24 671 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 SEC16BQ96JE7 1060 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 CRBNQ96SW2 442 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 HDAC8Q9BY41 377 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 FAM53CQ9NYF3 392 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 PRR13Q9NZ81 148 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 SUCOQ9UBS9 1254 aaKnown RBP6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 TMEM59LQ9UK28 342 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 PPT2Q9UMR5 302 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 EFR3BQ9Y2G0 817 aa6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P23-201ENST00000414981 LTKP29376 864 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 KCNMB1Q16558 191 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 TMEM67Q5HYA8 995 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 RALGPS1Q5JS13 557 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 FBXW10Q5XX13 1052 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 RNF111Q6ZNA4 994 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 POU5F2Q8N7G0 328 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 KIRREL1Q96J84 757 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 SLC6A18Q96N87 628 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 PCDHA11Q9Y5I1 949 aa6.01□□□□□ -1.45
HMGB3P23-201ENST00000414981 SIGLEC6O43699 453 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 HPXP02790 462 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 GLI1P08151 1106 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 RAC2P15153 192 aa6□□□□□ -1.45
HMGB3P23-201ENST00000414981 GUCY2CP25092 1073 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms