RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KANSL2Q9H9L4 492 aa31.43■■■□□ 2.62
VEGFA-207ENST00000413642 BTBD7Q9P203 1132 aa31.43■■■□□ 2.62
VEGFA-207ENST00000413642 RABGAP1Q9Y3P9 1069 aa31.43■■■□□ 2.62
VEGFA-207ENST00000413642 TRIM6-TRIM34B2RNG4 842 aa31.42■■■□□ 2.62
VEGFA-207ENST00000413642 CCL5P13501 91 aa31.42■■■□□ 2.62
VEGFA-207ENST00000413642 TANGO6Q9C0B7 1094 aa31.42■■■□□ 2.62
VEGFA-207ENST00000413642 NAPBQ9H115 298 aa31.42■■■□□ 2.62
VEGFA-207ENST00000413642 VCPKMTQ9H867 229 aa31.42■■■□□ 2.62
VEGFA-207ENST00000413642 A0A0D9SFI3 127 aa31.41■■■□□ 2.62
VEGFA-207ENST00000413642 INHAP05111 366 aa31.41■■■□□ 2.62
VEGFA-207ENST00000413642 PXYLP1Q8TE99 480 aa31.41■■■□□ 2.62
VEGFA-207ENST00000413642 RILPL2Q969X0 211 aa31.41■■■□□ 2.62
VEGFA-207ENST00000413642 UNC93B1Q9H1C4 597 aa31.41■■■□□ 2.62
VEGFA-207ENST00000413642 UBXN2AP68543 259 aa31.4■■■□□ 2.62
VEGFA-207ENST00000413642 CYP2B6P20813 491 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 PPARAQ07869 468 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 NMIQ13287 307 aaPredicted RBP31.39■■■□□ 2.62
VEGFA-207ENST00000413642 COG2Q14746 738 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 LBX2Q6XYB7 198 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 RNF208Q9H0X6 261 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 SH2D4AQ9H788 454 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 HELLSQ9NRZ9 838 aa31.39■■■□□ 2.62
VEGFA-207ENST00000413642 MAPK4P31152 587 aa31.38■■■□□ 2.61
VEGFA-207ENST00000413642 GPR142Q7Z601 462 aa31.38■■■□□ 2.61
VEGFA-207ENST00000413642 CCAR1Q8IX12 1150 aaKnown RBP31.38■■■□□ 2.61
VEGFA-207ENST00000413642 LPAR1Q92633 364 aa31.38■■■□□ 2.61
VEGFA-207ENST00000413642 OSBPL3Q9H4L5 887 aa31.38■■■□□ 2.61
VEGFA-207ENST00000413642 TRIM32Q13049 653 aa31.37■■■□□ 2.61
VEGFA-207ENST00000413642 SAMD1Q6SPF0 538 aaPredicted RBP31.37■■■□□ 2.61
VEGFA-207ENST00000413642 ZNF444Q8N0Y2 327 aaPredicted RBP31.37■■■□□ 2.61
VEGFA-207ENST00000413642 SHISA4Q96DD7 197 aa31.37■■■□□ 2.61
VEGFA-207ENST00000413642 INCENPQ9NQS7 918 aa31.37■■■□□ 2.61
VEGFA-207ENST00000413642 RAD21O60216 631 aa31.36■■■□□ 2.61
VEGFA-207ENST00000413642 CTDSPL2Q05D32 466 aa31.36■■■□□ 2.61
VEGFA-207ENST00000413642 PLEKHH3Q7Z736 793 aa31.36■■■□□ 2.61
VEGFA-207ENST00000413642 HOXC10Q9NYD6 342 aa31.36■■■□□ 2.61
VEGFA-207ENST00000413642 IGKV6D-41A0A0C4DH26 115 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 FLOT1O75955 427 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 DSG3P32926 999 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 MCMDC2Q4G0Z9 681 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 FAM47AQ5JRC9 791 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 WDR78Q5VTH9 848 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 ZNF589Q86UQ0 364 aaPredicted RBP31.35■■■□□ 2.61
VEGFA-207ENST00000413642 NUDT12Q9BQG2 462 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 TACC3Q9Y6A5 838 aa31.35■■■□□ 2.61
VEGFA-207ENST00000413642 WDR46O15213 610 aaKnown RBP31.34■■■□□ 2.61
VEGFA-207ENST00000413642 PDE4AP27815 886 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 MORN1Q5T089 497 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 TRIB2Q92519 343 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 USP6NLQ92738 828 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 ATG4CQ96DT6 458 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 FBXO28Q9NVF7 368 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 NYAP2Q9P242 653 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 RBBP6Q7Z6E9 1792 aaKnown RBP31.34■■■□□ 2.61
VEGFA-207ENST00000413642 KIAA0100Q14667 2235 aaKnown RBP31.34■■■□□ 2.61
VEGFA-207ENST00000413642 CENPFP49454 3210 aa31.34■■■□□ 2.61
VEGFA-207ENST00000413642 GJB1P08034 283 aa31.33■■■□□ 2.61
VEGFA-207ENST00000413642 SDSP20132 328 aa31.33■■■□□ 2.61
VEGFA-207ENST00000413642 CCNA1P78396 465 aa31.33■■■□□ 2.61
VEGFA-207ENST00000413642 NUP88Q99567 741 aaPredicted RBP31.33■■■□□ 2.61
VEGFA-207ENST00000413642 ZNF287Q9HBT7 754 aa31.33■■■□□ 2.61
VEGFA-207ENST00000413642 CWC22Q9HCG8 908 aaKnown RBP31.33■■■□□ 2.61
VEGFA-207ENST00000413642 CLIP2Q9UDT6 1046 aa31.33■■■□□ 2.61
VEGFA-207ENST00000413642 MYH8P13535 1937 aa31.33■■■□□ 2.61
VEGFA-207ENST00000413642 DOCK3Q8IZD9 2030 aa31.32■■■□□ 2.61
VEGFA-207ENST00000413642 PDE4BQ07343 736 aa31.32■■■□□ 2.6
VEGFA-207ENST00000413642 FAM83BQ5T0W9 1011 aa31.32■■■□□ 2.6
VEGFA-207ENST00000413642 SOCS4Q8WXH5 440 aa31.32■■■□□ 2.6
VEGFA-207ENST00000413642 CEP95Q96GE4 821 aa31.32■■■□□ 2.6
VEGFA-207ENST00000413642 MOV10L1Q9BXT6 1211 aaKnown RBP31.32■■■□□ 2.6
VEGFA-207ENST00000413642 GOPCQ9HD26 462 aa31.32■■■□□ 2.6
VEGFA-207ENST00000413642 GJA8P48165 433 aa31.31■■■□□ 2.6
VEGFA-207ENST00000413642 TFAP4Q01664 338 aa31.31■■■□□ 2.6
VEGFA-207ENST00000413642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.31■■■□□ 2.62e-6■□□□□ 9
VEGFA-207ENST00000413642 HMGCRP04035 888 aa31.3■■■□□ 2.6
VEGFA-207ENST00000413642 SLC3A2P08195 630 aaKnown RBP31.3■■■□□ 2.6
VEGFA-207ENST00000413642 CCL14Q16627 93 aa31.3■■■□□ 2.6
VEGFA-207ENST00000413642 NEDD1Q8NHV4 660 aa31.3■■■□□ 2.6
VEGFA-207ENST00000413642 U2AF1L4Q8WU68 220 aaKnown RBP31.3■■■□□ 2.6
VEGFA-207ENST00000413642 MTMR4Q9NYA4 1195 aa31.3■■■□□ 2.6
VEGFA-207ENST00000413642 PLXNB2O15031 1838 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 F5H6K3 240 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 TSPY3P0CV98 308 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 TSPY8P0CW00 308 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 KLRC3Q07444 240 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 ALX1Q15699 326 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 TICAM2Q86XR7 235 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 DEFB118Q96PH6 123 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 SPATC1LQ9H0A9 340 aa31.29■■■□□ 2.6
VEGFA-207ENST00000413642 TNRC18O15417 2968 aaPredicted RBP31.29■■■□□ 2.6
VEGFA-207ENST00000413642 GREB1LQ9C091 1923 aaPredicted RBP31.28■■■□□ 2.6
VEGFA-207ENST00000413642 NDUFB10O96000 172 aa31.28■■■□□ 2.6
VEGFA-207ENST00000413642 FGAP02671 866 aa31.28■■■□□ 2.6
VEGFA-207ENST00000413642 HSPD1P10809 573 aaKnown RBP31.28■■■□□ 2.6
VEGFA-207ENST00000413642 PTPREP23469 700 aa31.28■■■□□ 2.6
VEGFA-207ENST00000413642 RGS2P41220 211 aa31.28■■■□□ 2.6
VEGFA-207ENST00000413642 PLS1Q14651 629 aa31.28■■■□□ 2.6
VEGFA-207ENST00000413642 CCDC171Q6TFL3 1326 aa31.27■■■□□ 2.6
VEGFA-207ENST00000413642 XRCC5P13010 732 aaKnown RBP31.27■■■□□ 2.6
VEGFA-207ENST00000413642 MAP2K5Q13163 448 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms