RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 IFNL3Q8IZI9 196 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 SOCS4Q8WXH5 440 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 LPAR1Q92633 364 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 SHISA4Q96DD7 197 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 PORCNQ9H237 461 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 VCPKMTQ9H867 229 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 GJD2Q9UKL4 321 aa21.43■■□□□ 1.02
ITM2C-204ENST00000409704 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
ITM2C-204ENST00000409704 APPP05067 770 aa21.42■■□□□ 1.02
ITM2C-204ENST00000409704 COL11A1P12107 1806 aaPredicted RBP21.42■■□□□ 1.02
ITM2C-204ENST00000409704 RASA1P20936 1047 aa21.42■■□□□ 1.02
ITM2C-204ENST00000409704 Q3C1V9 767 aa21.42■■□□□ 1.02
ITM2C-204ENST00000409704 B4GALNT3Q6L9W6 998 aa21.42■■□□□ 1.02
ITM2C-204ENST00000409704 STK11IPQ8N1F8 1099 aa21.42■■□□□ 1.02
ITM2C-204ENST00000409704 TANGO6Q9C0B7 1094 aa21.42■■□□□ 1.02
ITM2C-204ENST00000409704 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
ITM2C-204ENST00000409704 CCDC129Q6ZRS4 1044 aa21.41■■□□□ 1.02
ITM2C-204ENST00000409704 CHD1LQ86WJ1 897 aa21.41■■□□□ 1.02
ITM2C-204ENST00000409704 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
ITM2C-204ENST00000409704 NACAP1Q9BZK3 213 aa21.41■■□□□ 1.02
ITM2C-204ENST00000409704 UNC93B1Q9H1C4 597 aa21.41■■□□□ 1.02
ITM2C-204ENST00000409704 KANSL2Q9H9L4 492 aa21.41■■□□□ 1.02
ITM2C-204ENST00000409704 BTBD7Q9P203 1132 aa21.41■■□□□ 1.02
ITM2C-204ENST00000409704 PLIN4Q96Q06 1357 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 FOXP2O15409 715 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 NUCB1Q02818 461 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 GPR142Q7Z601 462 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 RNF208Q9H0X6 261 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 NAPBQ9H115 298 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 MKNK2Q9HBH9 465 aa21.4■■□□□ 1.02
ITM2C-204ENST00000409704 WDR46O15213 610 aaKnown RBP21.39■■□□□ 1.01
ITM2C-204ENST00000409704 HMGCRP04035 888 aa21.39■■□□□ 1.01
ITM2C-204ENST00000409704 GJB1P08034 283 aa21.39■■□□□ 1.01
ITM2C-204ENST00000409704 CCNA1P78396 465 aa21.39■■□□□ 1.01
ITM2C-204ENST00000409704 ATP2B2Q01814 1243 aa21.39■■□□□ 1.01
ITM2C-204ENST00000409704 NKX2-3Q8TAU0 364 aa21.39■■□□□ 1.01
ITM2C-204ENST00000409704 NUDT12Q9BQG2 462 aa21.39■■□□□ 1.01
ITM2C-204ENST00000409704 GJA8P48165 433 aa21.38■■□□□ 1.01
ITM2C-204ENST00000409704 COG2Q14746 738 aa21.38■■□□□ 1.01
ITM2C-204ENST00000409704 PRPF38BQ5VTL8 546 aaKnown RBP21.38■■□□□ 1.01
ITM2C-204ENST00000409704 PLEKHH3Q7Z736 793 aa21.38■■□□□ 1.01
ITM2C-204ENST00000409704 CCAR1Q8IX12 1150 aaKnown RBP21.38■■□□□ 1.01
ITM2C-204ENST00000409704 TRIB2Q92519 343 aa21.38■■□□□ 1.01
ITM2C-204ENST00000409704 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
ITM2C-204ENST00000409704 LAMA4Q16363 1823 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 IGKV6D-41A0A0C4DH26 115 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 PRDM1O75626 825 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 PPARAQ07869 468 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 MORN1Q5T089 497 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 TICAM2Q86XR7 235 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 PLEKHM2Q8IWE5 1019 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 USP6NLQ92738 828 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 OSBPL3Q9H4L5 887 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
ITM2C-204ENST00000409704 GOPCQ9HD26 462 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 HELLSQ9NRZ9 838 aa21.37■■□□□ 1.01
ITM2C-204ENST00000409704 FRMPD3Q5JV73 1810 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 FLOT1O75955 427 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 CYP2B6P20813 491 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 DSG3P32926 999 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 U2AF1L4Q8WU68 220 aaKnown RBP21.36■■□□□ 1.01
ITM2C-204ENST00000409704 FAM227BQ96M60 508 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 APBA2Q99767 749 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 PAK6Q9NQU5 681 aaPredicted RBP21.36■■□□□ 1.01
ITM2C-204ENST00000409704 NYAP2Q9P242 653 aa21.36■■□□□ 1.01
ITM2C-204ENST00000409704 TRIM6-TRIM34B2RNG4 842 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 XRCC5P13010 732 aaKnown RBP21.35■■□□□ 1.01
ITM2C-204ENST00000409704 RGS2P41220 211 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 IRX6P78412 446 aaPredicted RBP21.35■■□□□ 1.01
ITM2C-204ENST00000409704 TRIM32Q13049 653 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 VPS53Q5VIR6 699 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 MB21D1Q8N884 522 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 ATG4CQ96DT6 458 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.35■■□□□ 1.01
ITM2C-204ENST00000409704 HOXC10Q9NYD6 342 aa21.35■■□□□ 1.01
ITM2C-204ENST00000409704 SLC3A2P08195 630 aaKnown RBP21.34■■□□□ 1.01
ITM2C-204ENST00000409704 ZKSCAN1P17029 563 aaPredicted RBP21.34■■□□□ 1.01
ITM2C-204ENST00000409704 PDE4BQ07343 736 aa21.34■■□□□ 1.01
ITM2C-204ENST00000409704 MAP2K5Q13163 448 aa21.34■■□□□ 1.01
ITM2C-204ENST00000409704 NMIQ13287 307 aaPredicted RBP21.34■■□□□ 1.01
ITM2C-204ENST00000409704 WDR78Q5VTH9 848 aa21.34■■□□□ 1.01
ITM2C-204ENST00000409704 ZNF444Q8N0Y2 327 aaPredicted RBP21.34■■□□□ 1.01
ITM2C-204ENST00000409704 RILPL2Q969X0 211 aa21.34■■□□□ 1.01
ITM2C-204ENST00000409704 SPATC1LQ9H0A9 340 aa21.34■■□□□ 1.01
ITM2C-204ENST00000409704 GRB14Q14449 540 aa21.33■■□□□ 1.01
ITM2C-204ENST00000409704 FAM83BQ5T0W9 1011 aa21.33■■□□□ 1.01
ITM2C-204ENST00000409704 ZNF589Q86UQ0 364 aaPredicted RBP21.33■■□□□ 1.01
ITM2C-204ENST00000409704 TRMT44Q8IYL2 757 aaKnown RBP21.33■■□□□ 1.01
ITM2C-204ENST00000409704 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
ITM2C-204ENST00000409704 MOV10L1Q9BXT6 1211 aaKnown RBP21.33■■□□□ 1.01
ITM2C-204ENST00000409704 FBXO28Q9NVF7 368 aa21.33■■□□□ 1.01
ITM2C-204ENST00000409704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.33■■□□□ 1.01
ITM2C-204ENST00000409704 ZMYM6O95789 1325 aa21.32■■□□□ 1
ITM2C-204ENST00000409704 SLC15A5A6NIM6 579 aa21.32■■□□□ 1
ITM2C-204ENST00000409704 RAD21O60216 631 aa21.32■■□□□ 1
ITM2C-204ENST00000409704 SGPL1O95470 568 aa21.32■■□□□ 1
ITM2C-204ENST00000409704 PTPREP23469 700 aa21.32■■□□□ 1
ITM2C-204ENST00000409704 MCMDC2Q4G0Z9 681 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms