RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GPKOWQ92917 476 aaPredicted RBP eCLIP17.4■□□□□ 0.38
SCAMP4-202ENST00000409472 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.38
SCAMP4-202ENST00000409472 XPO4Q9C0E2 1151 aaKnown RBP17.39■□□□□ 0.38
SCAMP4-202ENST00000409472 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 IL1R1P14778 569 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 PTPN21Q16825 1174 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 MFSD14BQ5SR56 506 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 TYW1BQ6NUM6 668 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 IFNKQ9P0W0 207 aa17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-202ENST00000409472 FAM205AQ6ZU69 1335 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 ZBTB22O15209 634 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 SCG2P13521 617 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 ZNF174Q15697 407 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 CPVLQ9H3G5 476 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 TMEM51Q9NW97 253 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 TRIM75PA6NK02 468 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 RASA1P20936 1047 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 PPP4CP60510 307 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 KAT14Q9H8E8 782 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
SCAMP4-202ENST00000409472 C6orf229H3BNL8 230 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 RIMBP2O15034 1052 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 ACTN4O43707 911 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 SMC2O95347 1197 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 XBP1P17861 261 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 CASP1P29466 404 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 HSP90AA4PQ58FG1 418 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 LRRC8AQ8IWT6 810 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 RASGRP4Q8TDF6 673 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 COL11A2P13942 1736 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 FLT1P17948 1338 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 BAG3O95817 575 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 HOXA10P31260 410 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 RHBDL3P58872 404 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 GSTO1P78417 241 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 CBX1P83916 185 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 POSTNQ15063 836 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 PFKFB3Q16875 520 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 PIK3AP1Q6ZUJ8 805 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 TSC1Q92574 1164 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 DPF2Q92785 391 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 MXD3Q9BW11 206 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 MYH1P12882 1939 aa17.37■□□□□ 0.37
SCAMP4-202ENST00000409472 CYTH3O43739 400 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 TEX11Q8IYF3 940 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 MAD2L2Q9UI95 211 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 MAN1B1Q9UKM7 699 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 STX8Q9UNK0 236 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 USP27XA6NNY8 438 aa17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 GTF2F1P35269 517 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 SYMPKQ92797 1274 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-202ENST00000409472 GPR75-ASB3A0A0A6YYF3 556 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 NLRP5P59047 1200 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 CCZ1BP86790 482 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 CCZ1P86791 482 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 TTC38Q5R3I4 469 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 DHX58Q96C10 678 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 NOL10Q9BSC4 688 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 PPEF1O14829 653 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 GTF2IP78347 998 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 DGKHQ86XP1 1220 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 ZNF579Q8NAF0 562 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 C16orf45Q96MC5 204 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 CEP131Q9UPN4 1083 aa17.35■□□□□ 0.37
SCAMP4-202ENST00000409472 BBOX1O75936 387 aa17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 PTGDRQ13258 359 aa17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 GRM4Q14833 912 aa17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 IL17AQ16552 155 aa17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 TMED8Q6PL24 325 aaPredicted RBP17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 TMC6Q7Z403 805 aa17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 TRMT44Q8IYL2 757 aaKnown RBP17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 FOCADQ5VW36 1801 aa17.34■□□□□ 0.37
SCAMP4-202ENST00000409472 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 IKBKBO14920 756 aa17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 FANCCQ00597 558 aa17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 MYL5Q02045 173 aa17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 CERS5Q8N5B7 392 aa17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 MED15Q96RN5 788 aa17.33■□□□□ 0.37
SCAMP4-202ENST00000409472 LDHCP07864 332 aa17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 MCM7P33993 719 aa17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 CDK8P49336 464 aa17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 BRMS1Q9HCU9 246 aa17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 FANCLQ9NW38 375 aa17.33■□□□□ 0.36
SCAMP4-202ENST00000409472 DAGLAQ9Y4D2 1042 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms