RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ATP2C1P98194 919 aaPredicted RBP19.2■□□□□ 0.66
NUP50-203ENST00000407019 RCSD1Q6JBY9 416 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 KAT14Q9H8E8 782 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
NUP50-203ENST00000407019 ERCC5P28715 1186 aaPredicted RBP19.19■□□□□ 0.66
NUP50-203ENST00000407019 TRAPPC10P48553 1259 aa19.19■□□□□ 0.66
NUP50-203ENST00000407019 C12orf60Q5U649 245 aa19.19■□□□□ 0.66
NUP50-203ENST00000407019 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
NUP50-203ENST00000407019 TRMT44Q8IYL2 757 aaKnown RBP19.19■□□□□ 0.66
NUP50-203ENST00000407019 GSTO1P78417 241 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 TFAP4Q01664 338 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 SLC4A8Q2Y0W8 1093 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 CT47A1Q5JQC4 288 aaPredicted RBP19.18■□□□□ 0.66
NUP50-203ENST00000407019 PAGE5Q96GU1 130 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 TMX1Q9H3N1 280 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 MKRN1Q9UHC7 482 aaKnown RBP19.18■□□□□ 0.66
NUP50-203ENST00000407019 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 AFMP43652 599 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 PTGDRQ13258 359 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 HSP90AA4PQ58FG1 418 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 TRAPPC3LQ5T215 181 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 PIK3AP1Q6ZUJ8 805 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 DGKHQ86XP1 1220 aa19.18■□□□□ 0.66
NUP50-203ENST00000407019 ROBO3Q96MS0 1386 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 VWA3AA6NCI4 1184 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 TUBB4AP04350 444 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 FAM182BQ5T319 152 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 AMOTL1Q8IY63 956 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 SH3RF3Q8TEJ3 882 aaPredicted RBP19.17■□□□□ 0.66
NUP50-203ENST00000407019 USP21Q9UK80 565 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 LY75O60449 1722 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 XDHP47989 1333 aa19.17■□□□□ 0.66
NUP50-203ENST00000407019 BAG3O95817 575 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 CALML3P27482 149 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 NFIXQ14938 502 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 CCDC178Q5BJE1 867 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 ZNF804AQ7Z570 1209 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 ANKS1AQ92625 1134 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 TBX2Q13207 712 aaPredicted RBP19.16■□□□□ 0.66
NUP50-203ENST00000407019 PTPN21Q16825 1174 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 PNMA1Q8ND90 353 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 DYNLL2Q96FJ2 89 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 GSDMAQ96QA5 445 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 MED15Q96RN5 788 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 IL17RBQ9NRM6 502 aa19.16■□□□□ 0.66
NUP50-203ENST00000407019 DPYDQ12882 1025 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 SLC51AQ86UW1 340 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 FCHSD1Q86WN1 690 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 PYM1Q9BRP8 204 aaKnown RBP19.15■□□□□ 0.66
NUP50-203ENST00000407019 MKNK2Q9HBH9 465 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 SH3GLB2Q9NR46 395 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 PPP4CP60510 307 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 GOLGA8FQ08AF8 430 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 GOLGA8DPQ0D2H9 430 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 GRM4Q14833 912 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 SPECC1LQ69YQ0 1117 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 SAMSN1Q9NSI8 373 aaKnown RBP19.15■□□□□ 0.66
NUP50-203ENST00000407019 SYNRGQ9UMZ2 1314 aa19.15■□□□□ 0.66
NUP50-203ENST00000407019 LDHCP07864 332 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.65
NUP50-203ENST00000407019 MCM7P33993 719 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 GNAQP50148 359 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 SPATA1Q5VX52 437 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 SYT10Q6XYQ8 523 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 C15orf52Q6ZUT6 534 aaKnown RBP19.14■□□□□ 0.65
NUP50-203ENST00000407019 BLIDQ8IZY5 108 aa19.14■□□□□ 0.65
NUP50-203ENST00000407019 ZNF215Q9UL58 517 aaPredicted RBP19.14■□□□□ 0.65
NUP50-203ENST00000407019 ARHGAP6O43182 974 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 CASP1P29466 404 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 FAM196AQ6ZSG2 479 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 IQUBQ8NA54 791 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 ERO1AQ96HE7 468 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 NAV1Q8NEY1 1877 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 ADAMTS3O15072 1205 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 TSPY3P0CV98 308 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 TSPY8P0CW00 308 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 CUL4BQ13620 913 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 NAA30Q147X3 362 aaPredicted RBP19.13■□□□□ 0.65
NUP50-203ENST00000407019 GRIK5Q16478 980 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 HOMER1Q86YM7 354 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 TMEM139Q8IV31 216 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 TGFBRAP1Q8WUH2 860 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 TCP11L1Q9NUJ3 509 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 CGNQ9P2M7 1197 aaKnown RBP19.13■□□□□ 0.65
NUP50-203ENST00000407019 PCDHA4Q9UN74 947 aa19.13■□□□□ 0.65
NUP50-203ENST00000407019 A0A1B0GTH6 734 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 SLU7O95391 586 aaKnown RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 CD44P16070 742 aaKnown RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 E2F4Q16254 413 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 KLHL10Q6JEL2 608 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 ZNF444Q8N0Y2 327 aaPredicted RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 STAG2Q8N3U4 1231 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
NUP50-203ENST00000407019 GPKOWQ92917 476 aaPredicted RBP eCLIP19.12■□□□□ 0.65
NUP50-203ENST00000407019 UBAP1LF5GYI3 381 aa19.12■□□□□ 0.65
NUP50-203ENST00000407019 NR1I3Q14994 352 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms