RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 PLCD1P51178 756 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
PCNX4-204ENST00000406949 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 TAB2Q9NYJ8 693 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 STIM1Q13586 685 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 INF2Q27J81 1249 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 LETM2Q2VYF4 491 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 PPP2R2CQ9Y2T4 447 aa13.48□□□□□ -0.25
PCNX4-204ENST00000406949 RIMBP2O15034 1052 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 TOM1O60784 492 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 DDAH1O94760 285 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 LDHCP07864 332 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 KIF4BQ2VIQ3 1234 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 TEX11Q8IYF3 940 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 PAGE5Q96GU1 130 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 SSBP05455 408 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 SLFN14P0C7P3 912 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 SEC23AQ15436 765 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
PCNX4-204ENST00000406949 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
PCNX4-204ENST00000406949 ATRNO75882 1429 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 KIF5CO60282 957 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 IPO7O95373 1038 aaKnown RBP13.46□□□□□ -0.25
PCNX4-204ENST00000406949 TMCO3Q6UWJ1 677 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCNX4-204ENST00000406949 TEX33O43247 280 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 CCDC175P0C221 793 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 BMP6P22004 513 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 TROAPQ12815 778 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 NYAP1Q6ZVC0 841 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 STAG2Q8N3U4 1231 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.25
PCNX4-204ENST00000406949 TCP11L1Q9NUJ3 509 aa13.46□□□□□ -0.25
PCNX4-204ENST00000406949 LAMA4Q16363 1823 aa13.46□□□□□ -0.26
PCNX4-204ENST00000406949 GSTO1P78417 241 aa13.46□□□□□ -0.26
PCNX4-204ENST00000406949 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.26
PCNX4-204ENST00000406949 GPIHBP1Q8IV16 184 aa13.46□□□□□ -0.26
PCNX4-204ENST00000406949 ZNF287Q9HBT7 754 aa13.46□□□□□ -0.26
PCNX4-204ENST00000406949 NARFQ9UHQ1 456 aa13.46□□□□□ -0.26
PCNX4-204ENST00000406949 TJP1Q07157 1748 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 SPATA31A5Q5VU36 1347 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 SPATA31A7Q8IWB4 1347 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 VEGFAP15692 232 aaPredicted RBP13.45□□□□□ -0.26
PCNX4-204ENST00000406949 UBXN1Q04323 297 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
PCNX4-204ENST00000406949 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
PCNX4-204ENST00000406949 ERCC3P19447 782 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 GNAQP50148 359 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 JAKMIP3Q5VZ66 844 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 TOGARAM2Q6ZUX3 1019 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 CCDC148Q8NFR7 591 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
PCNX4-204ENST00000406949 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
PCNX4-204ENST00000406949 PUF60Q9UHX1 559 aaKnown RBP13.45□□□□□ -0.26
PCNX4-204ENST00000406949 SOWAHDA6NJG2 315 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 IDEP14735 1019 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 PAK1Q13153 545 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 PKN1Q16512 942 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 WNT7AO00755 349 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 POLR3GO15318 223 aaPredicted RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 ASIC1P78348 528 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 MORC3Q14149 939 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 MTF1Q14872 753 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 NFIXQ14938 502 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 FBXO38Q6PIJ6 1188 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 USP21Q9UK80 565 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 SEMA3EO15041 775 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 CUL4BQ13620 913 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 ZNF569Q5MCW4 686 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 FBXO33Q7Z6M2 555 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
PCNX4-204ENST00000406949 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
PCNX4-204ENST00000406949 A0A087X0B3 334 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms