RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TTC6Q86TZ1 520 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 SLC44A5Q8NCS7 719 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 ZNF280CQ8ND82 737 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 DYNLL2Q96FJ2 89 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 PARK7Q99497 189 aaKnown RBP6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 PUS7LQ9H0K6 701 aaKnown RBP6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 DCP1AQ9NPI6 582 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 MCM9Q9NXL9 1143 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 SERPINB13Q9UIV8 391 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 PTCH2Q9Y6C5 1203 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 CENPFP49454 3210 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 LOC285556D6RIA3 1793 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 TNRC18O15417 2968 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 PEX10O60683 326 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 MYCP01106 439 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 ASNSP08243 561 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 BCRP11274 1271 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 SHMT1P34896 483 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 PSMC4P43686 418 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 IRX6P78412 446 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 KIF22Q14807 665 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 UBE3CQ15386 1083 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 ZYXQ15942 572 aaKnown RBP6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 TATDN1Q6P1N9 297 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 TMED8Q6PL24 325 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 NYAP1Q6ZVC0 841 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 KBTBD3Q8NAB2 608 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 PI4K2BQ8TCG2 481 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 GPATCH3Q96I76 525 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 TRIM47Q96LD4 638 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 WDR18Q9BV38 432 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 EHD4Q9H223 541 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 AS3MTQ9HBK9 375 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 AGTPBP1Q9UPW5 1226 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 SUPT16HQ9Y5B9 1047 aaKnown RBP6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 SLC4A4Q9Y6R1 1079 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 CEP290O15078 2479 aa6.95□□□□□ -1.3
HMGB1P20-201ENST00000402555 DOCK3Q8IZD9 2030 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 USP17L12C9JPN9 530 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 USP17L21D6R901 530 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 M0R2C6 588 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 RNF113AO15541 343 aaKnown RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 FMNL1O95466 1100 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 MX1P20591 662 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 OSBPP22059 807 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 GUCY1A2P33402 732 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 BACE1P56817 501 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 GABPAQ06546 454 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 HDAC1Q13547 482 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 RAB3GAP1Q15042 981 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 ABCB5Q2M3G0 1257 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 CERKLQ49MI3 558 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 SH3D19Q5HYK7 790 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 ZSCAN25Q6NSZ9 544 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 PROCA1Q8NCQ7 364 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 ACER1Q8TDN7 264 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 SMCR8Q8TEV9 937 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 SH3TC2Q8TF17 1288 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 OSBP2Q969R2 916 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 SEC62Q99442 399 aaKnown RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 ASCC2Q9H1I8 757 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 TMOD4Q9NZQ9 345 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 MGAMO43451 1857 aa6.94□□□□□ -1.3
HMGB1P20-201ENST00000402555 GRXCR2A6NFK2 248 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 USP17L10C9JJH3 530 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 MPHOSPH10O00566 681 aaKnown RBP6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 ERC2O15083 957 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 GLRX3O76003 335 aaKnown RBP6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 RGS20O76081 388 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 IGHDP01880 384 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 AKR1B1P15121 316 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 RGS19P49795 217 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 MLLT1Q03111 559 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 PRKCZQ05513 592 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 SEPT2Q15019 361 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 ARHGEF6Q15052 776 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 SLC9C1Q4G0N8 1177 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 ANKRD13CQ8N6S4 541 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 APPBP2Q92624 585 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 STRBPQ96SI9 672 aaKnown RBP6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 P2RX7Q99572 595 aaKnown RBP6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 FEZ1Q99689 392 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 FSD1Q9BTV5 496 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 TBC1D2Q9BYX2 928 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 LNPKQ9C0E8 428 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 CABP5Q9NP86 173 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 ATP8A2Q9NTI2 1148 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 SRRDQ9UH36 339 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 SLC45A1Q9Y2W3 748 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 TTC41PQ6P2S7 1318 aa6.93□□□□□ -1.3
HMGB1P20-201ENST00000402555 MYPNQ86TC9 1320 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms