RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PLEKHH3Q7Z736 793 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 UNC93B1Q9H1C4 597 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 MGAMO43451 1857 aa16.43■□□□□ 0.22
CXCL12-205ENST00000395794 PEX10O60683 326 aa16.42■□□□□ 0.22
CXCL12-205ENST00000395794 HMGCRP04035 888 aa16.42■□□□□ 0.22
CXCL12-205ENST00000395794 SLC3A2P08195 630 aaKnown RBP16.42■□□□□ 0.22
CXCL12-205ENST00000395794 CYP2B6P20813 491 aa16.42■□□□□ 0.22
CXCL12-205ENST00000395794 LBX2Q6XYB7 198 aa16.42■□□□□ 0.22
CXCL12-205ENST00000395794 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
CXCL12-205ENST00000395794 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
CXCL12-205ENST00000395794 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
CXCL12-205ENST00000395794 MYH7P12883 1935 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 SMIM22K7EJ46 135 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 RAD21O60216 631 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 TFRCP02786 760 aaKnown RBP16.41■□□□□ 0.22
CXCL12-205ENST00000395794 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
CXCL12-205ENST00000395794 EEF2P13639 858 aaKnown RBP16.41■□□□□ 0.22
CXCL12-205ENST00000395794 RGS2P41220 211 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 GPR142Q7Z601 462 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 ZNF444Q8N0Y2 327 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-205ENST00000395794 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 U2AF1L4Q8WU68 220 aaKnown RBP16.41■□□□□ 0.22
CXCL12-205ENST00000395794 PORCNQ9H237 461 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 GOPCQ9HD26 462 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
CXCL12-205ENST00000395794 SPDYE16A6NNV3 312 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-205ENST00000395794 WDR46O15213 610 aaKnown RBP16.4■□□□□ 0.22
CXCL12-205ENST00000395794 FLOT1O75955 427 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 SGPL1O95470 568 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 PDE1AP54750 535 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 DEFB118Q96PH6 123 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 LNPKQ9C0E8 428 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 NAPBQ9H115 298 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 SALL3Q9BXA9 1300 aa16.4■□□□□ 0.22
CXCL12-205ENST00000395794 CNMDO75829 334 aa16.39■□□□□ 0.21
CXCL12-205ENST00000395794 ZKSCAN1P17029 563 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-205ENST00000395794 PDE4BQ07343 736 aa16.39■□□□□ 0.21
CXCL12-205ENST00000395794 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
CXCL12-205ENST00000395794 MB21D1Q8N884 522 aa16.39■□□□□ 0.21
CXCL12-205ENST00000395794 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
CXCL12-205ENST00000395794 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
CXCL12-205ENST00000395794 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.39■□□□□ 0.21
CXCL12-205ENST00000395794 HMX1Q9NP08 348 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-205ENST00000395794 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 RASA1P20936 1047 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 PLS1Q14651 629 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 SHISA4Q96DD7 197 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 APBA2Q99767 749 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 HTATIP2Q9BUP3 242 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 EPB41L4AQ9HCS5 686 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-205ENST00000395794 PAK6Q9NQU5 681 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-205ENST00000395794 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
CXCL12-205ENST00000395794 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
CXCL12-205ENST00000395794 SLC15A5A6NIM6 579 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 FARP2O94887 1054 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-205ENST00000395794 MAP2K5Q13163 448 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 MORN1Q5T089 497 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 CHD1LQ86WJ1 897 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 TICAM2Q86XR7 235 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 SMC5Q8IY18 1101 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 TRIB2Q92519 343 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 DPF3Q92784 378 aa16.37■□□□□ 0.21
CXCL12-205ENST00000395794 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
CXCL12-205ENST00000395794 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
CXCL12-205ENST00000395794 PRDM1O75626 825 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 PTPREP23469 700 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 USP6NLQ92738 828 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 SPATC1LQ9H0A9 340 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
CXCL12-205ENST00000395794 STRNO43815 780 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
CXCL12-205ENST00000395794 PPARAQ07869 468 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 TRIM32Q13049 653 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 SHCBP1Q8NEM2 672 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 RILPL2Q969X0 211 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.35■□□□□ 0.21
CXCL12-205ENST00000395794 MOV10L1Q9BXT6 1211 aaKnown RBP16.35■□□□□ 0.21
CXCL12-205ENST00000395794 MROH8Q9H579 483 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 CLIP2Q9UDT6 1046 aa16.35■□□□□ 0.21
CXCL12-205ENST00000395794 IGHDP01880 384 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 NUCB1Q02818 461 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms