RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 SH3GLB2Q9NR46 395 aa17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 PODXL2Q9NZ53 605 aa17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 TRPC5Q9UL62 973 aaPredicted RBP17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 WNT7AO00755 349 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 BBOX1O75936 387 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 TNNT1P13805 278 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 ST5P78524 1137 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 ATP2C1P98194 919 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 TPD52L1Q16890 204 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 TTC38Q5R3I4 469 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 DYNLL2Q96FJ2 89 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 CCDC34Q96HJ3 373 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 RBM17Q96I25 401 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 C16orf45Q96MC5 204 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 DACH1Q9UI36 760 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 SLFN14P0C7P3 912 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 KCNJ6P48051 423 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 UBASH3AP57075 661 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 CT47A1Q5JQC4 288 aaPredicted RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 MEX3CQ5U5Q3 659 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 ARMCX5Q6P1M9 558 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 PDILTQ8N807 584 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 ENOX1Q8TC92 643 aaKnown RBP17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 TGFBRAP1Q8WUH2 860 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 FANCLQ9NW38 375 aa17.51■□□□□ 0.39
UBE2D3-207ENST00000394801 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 RIOK3O14730 519 aaKnown RBP17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 VEGFAP15692 232 aaPredicted RBP17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 CALML3P27482 149 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 GNAQP50148 359 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 NLRP5P59047 1200 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 GRM4Q14833 912 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 FAM163AQ96GL9 167 aaPredicted RBP17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 EPSTI1Q96J88 318 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 GGA1Q9UJY5 639 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 PAXBP1Q9Y5B6 917 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 A0A087X0B3 334 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 UFL1O94874 794 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 ZNF174Q15697 407 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 NYAP1Q6ZVC0 841 aa17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 GPR101Q96P66 508 aaPredicted RBP17.5■□□□□ 0.39
UBE2D3-207ENST00000394801 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-207ENST00000394801 PLCD1P51178 756 aa17.49■□□□□ 0.39
UBE2D3-207ENST00000394801 PTGDRQ13258 359 aa17.49■□□□□ 0.39
UBE2D3-207ENST00000394801 ZNF444Q8N0Y2 327 aaPredicted RBP17.49■□□□□ 0.39
UBE2D3-207ENST00000394801 CCAR2Q8N163 923 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-207ENST00000394801 SYMPKQ92797 1274 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-207ENST00000394801 SERPINC1P01008 464 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 ZNF18P17022 549 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 SFPQP23246 707 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■□□□□ 10.5
UBE2D3-207ENST00000394801 DPF2Q92785 391 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 NAV1Q8NEY1 1877 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 USP27XA6NNY8 438 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 CTIFO43310 598 aaKnown RBP17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 TSPY3P0CV98 308 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 TSPY8P0CW00 308 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 ERCC5P28715 1186 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 SMAP1Q8IYB5 467 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 GRAMD1CQ8IYS0 662 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 CRAMP1Q96RY5 1269 aa17.48■□□□□ 0.39
UBE2D3-207ENST00000394801 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 PLCG2P16885 1265 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 RASA1P20936 1047 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 VSTM4Q8IW00 320 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 STAG2Q8N3U4 1231 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 DHX58Q96C10 678 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 PAGE5Q96GU1 130 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 M0R2N6 131 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 BTDP43251 543 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.391e-7■□□□□ 9.5
UBE2D3-207ENST00000394801 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 TBC1D16Q8TBP0 767 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 PRDM4Q9UKN5 801 aa17.47■□□□□ 0.39
UBE2D3-207ENST00000394801 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 CFAP100Q494V2 611 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 ARL6IP4Q66PJ3 421 aaKnown RBP17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 C16orf86Q6ZW13 317 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 GSDMAQ96QA5 445 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 MED15Q96RN5 788 aa17.46■□□□□ 0.39
UBE2D3-207ENST00000394801 POLLQ9UGP5 575 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms