RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 UAP1L1Q3KQV9 507 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 BRAPQ7Z569 592 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 ST13P5Q8NFI4 369 aaPredicted RBP4.15□□□□□ -1.75
XRN1-202ENST00000392981 GRIN3AQ8TCU5 1115 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 ELMO3Q96BJ8 720 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 AAASQ9NRG9 546 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 SNX5Q9Y5X3 404 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 DGKBQ9Y6T7 804 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 A0A1W2PRQ8 180 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 TRIM64A6NGJ6 449 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 TRIM64BA6NI03 449 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 GOLGA8AA7E2F4 631 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 GOLGA8BA8MQT2 603 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 SLC5A1P13866 664 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 CTNNA1P35221 906 aaKnown RBP4.15□□□□□ -1.75
XRN1-202ENST00000392981 FCHSD1Q86WN1 690 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 NSUN6Q8TEA1 469 aaKnown RBP4.15□□□□□ -1.75
XRN1-202ENST00000392981 ANP32BQ92688 251 aaKnown RBP4.15□□□□□ -1.75
XRN1-202ENST00000392981 LGR4Q9BXB1 951 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 NMRK2Q9NPI5 230 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 PGPEP1Q9NXJ5 209 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 SUSD5O60279 629 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 SLC3A2P08195 630 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 SDSP20132 328 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 SERPINB3P29508 390 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 CYP2C19P33261 490 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 BCAMP50895 628 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 SLC7A5Q01650 507 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 ASIC2Q16515 512 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 CCNG2Q16589 344 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 ISM2Q6H9L7 571 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 PPFIBP1Q86W92 1011 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 RASSF3Q86WH2 238 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 TCEAL8Q8IYN2 117 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 AARSD1Q9BTE6 412 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 SLC6A16Q9GZN6 736 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 NGRNQ9NPE2 291 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 ENAMQ9NRM1 1142 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 METRNQ9UJH8 293 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 ARHGAP26Q9UNA1 814 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 BLACEA4D250 179 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 PRRT4C9JH25 899 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 NEMP1O14524 444 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 GNRH1P01148 92 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 ECI1P42126 302 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 STARD3Q14849 445 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 NOL9Q5SY16 702 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 ZC3H7AQ8IWR0 971 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 PMEPA1Q969W9 287 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 NCOA5Q9HCD5 579 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 GPAMQ9HCL2 828 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 TMEM238LA0A1B0GVL6 79 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 M0R2C6 588 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 GUCY1A3Q02108 690 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 TAF5Q15542 800 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 UVSSAQ2YD98 709 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 IPO4Q8TEX9 1081 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 ZNF622Q969S3 477 aaKnown RBP eCLIP4.14□□□□□ -1.756e-7■■□□□ 12.6
XRN1-202ENST00000392981 OSMRQ99650 979 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 FAM167BQ9BTA0 163 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 GIT1Q9Y2X7 761 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 SASH3O75995 380 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 FBXO21O94952 628 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 FGFR1P11362 822 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 TFE3P19532 575 aaPredicted RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 KPNA1P52294 538 aaPredicted RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 GRIN2CQ14957 1233 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 CCDC184Q52MB2 194 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 FAM133BQ5BKY9 247 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 REC114Q7Z4M0 266 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 SH3RF1Q7Z6J0 888 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 DDX53Q86TM3 631 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 FTSJ3Q8IY81 847 aaKnown RBP4.14□□□□□ -1.75
XRN1-202ENST00000392981 SLC39A7Q92504 469 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 CHIC2Q9UKJ5 165 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 PCDHA4Q9UN74 947 aa4.14□□□□□ -1.75
XRN1-202ENST00000392981 A0A087X0B3 334 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 A6NCN8 305 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 RARAP10276 462 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TRIM27P14373 513 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 GUCY2CP25092 1073 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 PMS1P54277 932 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 ETF1P62495 437 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 RASSF7Q02833 373 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 MAP1SQ66K74 1059 aaPredicted RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 CIAPIN1Q6FI81 312 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 POLMQ9NP87 494 aaPredicted RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 BICDL2A1A5D9 508 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 OFD1O75665 1012 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 MAP3K12Q12852 859 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TAF11Q15544 211 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TMEM95Q3KNT9 176 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 USP53Q70EK8 1073 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 SV2BQ7L1I2 683 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 NDUFAF2Q8N183 169 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 RSPH1Q8WYR4 309 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 HDAC2Q92769 488 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 MKRN2Q9H000 416 aaKnown RBP4.13□□□□□ -1.75
XRN1-202ENST00000392981 RNF38Q9H0F5 515 aa4.13□□□□□ -1.75
XRN1-202ENST00000392981 TPCN1Q9ULQ1 816 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms