RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ANKLE2Q86XL3 938 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 PNMA6AP0CW24 399 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-204ENST00000391814 NNTQ13423 1086 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
SHANK1-204ENST00000391814 C11orf57Q6ZUT1 292 aaPredicted RBP17.81■□□□□ 0.44
SHANK1-204ENST00000391814 CACTINQ8WUQ7 758 aaKnown RBP17.81■□□□□ 0.44
SHANK1-204ENST00000391814 ABCB4P21439 1286 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 RBL2Q08999 1139 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 ACTR5Q9H9F9 607 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-204ENST00000391814 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 EIF3CLB5ME19 914 aaKnown RBP17.8■□□□□ 0.44
SHANK1-204ENST00000391814 ZBTB22O15209 634 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 ARHGAP44Q17R89 818 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 DACT3Q96B18 629 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-204ENST00000391814 SPDL1Q96EA4 605 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 EIF3CQ99613 913 aaKnown RBP17.8■□□□□ 0.44
SHANK1-204ENST00000391814 YIPF3Q9GZM5 350 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 MAP3K7O43318 606 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 CABP7Q86V35 215 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 IFNL2Q8IZJ0 200 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 STX10O60499 249 aa17.8■□□□□ 0.44
SHANK1-204ENST00000391814 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 RCN2Q14257 317 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 PDZD8Q8NEN9 1154 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 NDUFB9Q9Y6M9 179 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 RANBP1P43487 201 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 HSP90AA5PQ58FG0 334 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 LCA5Q86VQ0 697 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 FNBP1Q96RU3 617 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 ABCB6Q9NP58 842 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 ANGEL1Q9UNK9 670 aaKnown RBP17.79■□□□□ 0.44
SHANK1-204ENST00000391814 CLIC4Q9Y696 253 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 FOXO3O43524 673 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 TDRD7Q8NHU6 1098 aaKnown RBP17.79■□□□□ 0.44
SHANK1-204ENST00000391814 SIRT1Q96EB6 747 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 INTUQ9ULD6 942 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 TADA2BQ86TJ2 420 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 PALD1Q9ULE6 856 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 EPHB4P54760 987 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 AMOTL2Q9Y2J4 779 aa17.79■□□□□ 0.44
SHANK1-204ENST00000391814 HARSP12081 509 aaKnown RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 BIRC2Q13490 618 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 EIF4A2Q14240 407 aaKnown RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 HELBQ8NG08 1087 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 KLHDC4Q8TBB5 520 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 USP28Q96RU2 1077 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 TRIM6Q9C030 488 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 EPB41L5Q9HCM4 733 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 CASP14P31944 242 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 PHBP35232 272 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 ZMAT2Q96NC0 199 aaKnown RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 SAP30BPQ9UHR5 308 aaKnown RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 PRAG1Q86YV5 1406 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 MAEAQ7L5Y9 396 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-204ENST00000391814 MGEA5O60502 916 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 CTAGE3PQ8IX95 158 aa17.78■□□□□ 0.44
SHANK1-204ENST00000391814 TRPA1O75762 1119 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 NAA35Q5VZE5 725 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 GDAP1Q8TB36 358 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 MAIP1Q8WWC4 291 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 CLIC6Q96NY7 704 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 STK10O94804 968 aaKnown RBP17.77■□□□□ 0.44
SHANK1-204ENST00000391814 HAUS1Q96CS2 278 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 PHACTR3Q96KR7 559 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 SOWAHDA6NJG2 315 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 TCP1P17987 556 aaKnown RBP17.77■□□□□ 0.44
SHANK1-204ENST00000391814 PHEXP78562 749 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 RASSF7Q02833 373 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 CASP8Q14790 479 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 SCYL3Q8IZE3 742 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 GRK7Q8WTQ7 553 aa17.77■□□□□ 0.44
SHANK1-204ENST00000391814 A0A087WWV3 80 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 hCG_1642624A0A1W2PR95 340 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.43
SHANK1-204ENST00000391814 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 RGS12O14924 1447 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 PPFIA2O75334 1257 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 RNF8O76064 485 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 GCNT3O95395 438 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 CCDC93Q567U6 631 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 KLHL29Q96CT2 875 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 GPCPD1Q9NPB8 672 aa17.77■□□□□ 0.43
SHANK1-204ENST00000391814 ACEP12821 1306 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 HAUS4Q9H6D7 363 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 EPN1Q9Y6I3 576 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-204ENST00000391814 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-204ENST00000391814 CCDC169A6NNP5 214 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 RSAD2Q8WXG1 361 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 PCDHA7Q9UN72 937 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 CREB3O43889 395 aa17.76■□□□□ 0.43
SHANK1-204ENST00000391814 APOEP02649 317 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms