RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SLC15A5A6NIM6 579 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 SMIM22K7EJ46 135 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.85
SMN2-201ENST00000380741 AKR1B1P15121 316 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 PTPREP23469 700 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 UBE3CQ15386 1083 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 CLEC10AQ8IUN9 316 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 C7orf61Q8IZ16 206 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 FLRT1Q9NZU1 646 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 IVNS1ABPQ9Y6Y0 642 aa20.33■□□□□ 0.85
SMN2-201ENST00000380741 DNAH12Q6ZR08 3092 aa20.33■□□□□ 0.84
SMN2-201ENST00000380741 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 GRB14Q14449 540 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 COG2Q14746 738 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 KIAA1755Q5JYT7 1200 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 LHX8Q68G74 356 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 TANGO6Q9C0B7 1094 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 STAP2Q9UGK3 403 aa20.32■□□□□ 0.84
SMN2-201ENST00000380741 PFASO15067 1338 aa20.31■□□□□ 0.84
SMN2-201ENST00000380741 ICA1Q05084 483 aa20.31■□□□□ 0.84
SMN2-201ENST00000380741 C12orf60Q5U649 245 aa20.31■□□□□ 0.84
SMN2-201ENST00000380741 SIAH1Q8IUQ4 282 aa20.31■□□□□ 0.84
SMN2-201ENST00000380741 ZMYND8Q9ULU4 1186 aaPredicted RBP20.31■□□□□ 0.84
SMN2-201ENST00000380741 ZNF236Q9UL36 1845 aa20.31■□□□□ 0.84
SMN2-201ENST00000380741 USP17L12C9JPN9 530 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 USP17L21D6R901 530 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 HOXC6P09630 235 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 CDK8P49336 464 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 AMOTL1Q8IY63 956 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
SMN2-201ENST00000380741 LPAR1Q92633 364 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
SMN2-201ENST00000380741 PUS7LQ9H0K6 701 aaKnown RBP20.3■□□□□ 0.84
SMN2-201ENST00000380741 ARHGEF10LQ9HCE6 1279 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 HOXC10Q9NYD6 342 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 SLC4A4Q9Y6R1 1079 aa20.3■□□□□ 0.84
SMN2-201ENST00000380741 A0A1W2PPC1 479 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 COL6A1P12109 1028 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 MFSD14CQ5VZR4 134 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 ZSCAN25Q6NSZ9 544 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 C16orf86Q6ZW13 317 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 SPICE1Q8N0Z3 855 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 NPLOC4Q8TAT6 608 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 SPATC1LQ9H0A9 340 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 TMX2Q9Y320 296 aa20.29■□□□□ 0.84
SMN2-201ENST00000380741 COL11A1P12107 1806 aaPredicted RBP20.28■□□□□ 0.84
SMN2-201ENST00000380741 ATP2B2Q01814 1243 aa20.28■□□□□ 0.84
SMN2-201ENST00000380741 CCDC17Q96LX7 622 aa20.28■□□□□ 0.84
SMN2-201ENST00000380741 SH2D4AQ9H788 454 aa20.28■□□□□ 0.84
SMN2-201ENST00000380741 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
SMN2-201ENST00000380741 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
SMN2-201ENST00000380741 FLOT1O75955 427 aa20.27■□□□□ 0.84
SMN2-201ENST00000380741 SYN1P17600 705 aa20.27■□□□□ 0.84
SMN2-201ENST00000380741 DSG3P32926 999 aa20.27■□□□□ 0.84
SMN2-201ENST00000380741 CTR9Q6PD62 1173 aa20.27■□□□□ 0.84
SMN2-201ENST00000380741 GDF15Q99988 308 aa20.27■□□□□ 0.84
SMN2-201ENST00000380741 GREB1LQ9C091 1923 aaPredicted RBP20.26■□□□□ 0.83
SMN2-201ENST00000380741 IGHA2P01877 340 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 ERCC3P19447 782 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 ADORA2AP29274 412 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 CYP2C19P33261 490 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 SHCBP1Q8NEM2 672 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 ATG4CQ96DT6 458 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
SMN2-201ENST00000380741 SOX1O00570 391 aaPredicted RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 WDR46O15213 610 aaKnown RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 STRNO43815 780 aa20.25■□□□□ 0.83
SMN2-201ENST00000380741 EEF2P13639 858 aaKnown RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 PLS1Q14651 629 aa20.25■□□□□ 0.83
SMN2-201ENST00000380741 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
SMN2-201ENST00000380741 DPP9Q86TI2 863 aa20.25■□□□□ 0.83
SMN2-201ENST00000380741 TRPV1Q8NER1 839 aa20.25■□□□□ 0.83
SMN2-201ENST00000380741 STRBPQ96SI9 672 aaKnown RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 ARPP21Q9UBL0 812 aaPredicted RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 DDX20Q9UHI6 824 aaKnown RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
SMN2-201ENST00000380741 CNGA1P29973 690 aa20.24■□□□□ 0.83
SMN2-201ENST00000380741 BMP8BP34820 402 aa20.24■□□□□ 0.83
SMN2-201ENST00000380741 LRRC26Q2I0M4 334 aa20.24■□□□□ 0.83
SMN2-201ENST00000380741 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
SMN2-201ENST00000380741 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
SMN2-201ENST00000380741 KANSL2Q9H9L4 492 aa20.24■□□□□ 0.83
SMN2-201ENST00000380741 MSCO60682 206 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 COBLO75128 1261 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 CYBAP13498 195 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 MAGEA10P43363 369 aaPredicted RBP20.23■□□□□ 0.83
SMN2-201ENST00000380741 OLFML2BQ68BL8 750 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 NCAPG2Q86XI2 1143 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMN2-201ENST00000380741 MROH8Q9H579 483 aa20.23■□□□□ 0.83
SMN2-201ENST00000380741 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
SMN2-201ENST00000380741 TMEM132BQ14DG7 1078 aa20.22■□□□□ 0.83
SMN2-201ENST00000380741 OSBP2Q969R2 916 aa20.22■□□□□ 0.83
SMN2-201ENST00000380741 LRCH3Q96II8 777 aa20.22■□□□□ 0.83
SMN2-201ENST00000380741 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
SMN2-201ENST00000380741 COL6A3P12111 3177 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms