RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 HAUS1Q96CS2 278 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 SPATS2LQ9NUQ6 558 aaKnown RBP10.57□□□□□ -0.72
SNX1-202ENST00000380285 NIP7Q9Y221 180 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNX1-202ENST00000380285 ADCY7P51828 1080 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 EPHB4P54760 987 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 LRCH2Q5VUJ6 765 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
SNX1-202ENST00000380285 KLHL7Q8IXQ5 586 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 SUDS3Q9H7L9 328 aaPredicted RBP10.57□□□□□ -0.72
SNX1-202ENST00000380285 TNNQ9UQP3 1299 aa10.57□□□□□ -0.72
SNX1-202ENST00000380285 LAD1O00515 517 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 NR1I2O75469 434 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 PFKFB1P16118 471 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 STRN3Q13033 797 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 BIRC3Q13489 604 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 PPP1R2P3Q6NXS1 205 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 C2CD5Q86YS7 1000 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 NOSTRINQ8IVI9 506 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 METTL14Q9HCE5 456 aaKnown RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 PPANQ9NQ55 473 aaKnown RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 PPP1R1BQ9UD71 204 aaPredicted RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 ZMYM6O95789 1325 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 C17orf53Q8N3J3 647 aaPredicted RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 PHACTR3Q96KR7 559 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 MIS12Q9H081 205 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 RIPOR2Q9Y4F9 1068 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 LONRF2Q1L5Z9 754 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 VEZTQ9HBM0 779 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 ARHGEF35A5YM69 484 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 KRIT1O00522 736 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 GTPBP6O43824 516 aaPredicted RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 XRCC5P13010 732 aaKnown RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 ME3Q16798 604 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 C10orf76Q5T2E6 689 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 MTMR6Q9Y217 621 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 GEN1Q17RS7 908 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 TRIM42Q8IWZ5 723 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 E7EWF7 191 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 THAP12O43422 761 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 ALS2CLQ60I27 953 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 SNX29Q8TEQ0 813 aa10.56□□□□□ -0.72
SNX1-202ENST00000380285 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
SNX1-202ENST00000380285 DNAJC8O75937 253 aaPredicted RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 RRAGAQ7L523 313 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 PPP1R13BQ96KQ4 1090 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 PPP6R2O75170 966 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 PPFIA2O75334 1257 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 IL13P35225 146 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 HERC4Q5GLZ8 1057 aaPredicted RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 CABP7Q86V35 215 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 CCDC197Q8NCU1 140 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 CFAP65Q6ZU64 1925 aaKnown RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 IL2RBP14784 551 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 GPT2Q8TD30 523 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 LPIN2Q92539 896 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 ARHGEF10LQ9HCE6 1279 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 RRP15Q9Y3B9 282 aaKnown RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 TBC1D8O95759 1140 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 EEF1GP26641 437 aaKnown RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 DCUN1D2Q6PH85 259 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 EPN1Q9Y6I3 576 aaPredicted RBP10.55□□□□□ -0.72
SNX1-202ENST00000380285 BEND3Q5T5X7 828 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 MIGA1Q8NAN2 632 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 STAG1Q8WVM7 1258 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 PASKQ96RG2 1323 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 CPA1P15085 419 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 RXRAP19793 462 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 GSDMAQ96QA5 445 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 ADAMTS12P58397 1594 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 FAM227BQ96M60 508 aa10.55□□□□□ -0.72
SNX1-202ENST00000380285 H0YCG3 227 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 PDE8AO60658 829 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 HSPA6P17066 643 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 LONP1P36776 959 aaKnown RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 ADKP55263 362 aaKnown RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 PNOCQ13519 176 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 REXO1Q8N1G1 1221 aaKnown RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 FAM81BQ96LP2 452 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 P4HA1P13674 534 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 TRAPPC10P48553 1259 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 SSH3Q8TE77 659 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 KIF11P52732 1056 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 JARID2Q92833 1246 aaPredicted RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 EYA1Q99502 592 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 TRIM4Q9C037 500 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 SLFNL1Q499Z3 407 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 FNBP4Q8N3X1 1017 aaPredicted RBP10.54□□□□□ -0.72
SNX1-202ENST00000380285 NFATC2IPQ8NCF5 419 aa10.54□□□□□ -0.72
SNX1-202ENST00000380285 RILPQ96NA2 401 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms