RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
ITSN1-201ENST00000379960 SPRED3Q2MJR0 410 aa12.14□□□□□ -0.47
ITSN1-201ENST00000379960 MFN1Q8IWA4 741 aa12.14□□□□□ -0.47
ITSN1-201ENST00000379960 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
ITSN1-201ENST00000379960 NUP58Q9BVL2 599 aa12.14□□□□□ -0.47
ITSN1-201ENST00000379960 IL1RAPL2Q9NP60 686 aa12.14□□□□□ -0.47
ITSN1-201ENST00000379960 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
ITSN1-201ENST00000379960 SOWAHDA6NJG2 315 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 EIF4E1BA6NMX2 242 aaKnown RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 ATP2C2O75185 946 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 GNAT1P11488 350 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 SCNN1BP51168 640 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 CCDC121Q6ZUS5 278 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 ZNF473Q8WTR7 871 aaKnown RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 OSBPL9Q96SU4 736 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 MYD88Q99836 296 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 HOOK1Q9UJC3 728 aaKnown RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 ERICH2A1L162 156 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 HSPA1LP34931 641 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 HDLBPQ00341 1268 aaKnown RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 PTH1RQ03431 593 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 ARHGAP22Q7Z5H3 698 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 TC2NQ8N9U0 490 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 FAM81AQ8TBF8 368 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 Q6ZUG5 572 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-201ENST00000379960 SIL1Q9H173 461 aa12.13□□□□□ -0.47
ITSN1-201ENST00000379960 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 LINGO3P0C6S8 592 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 ATP5JP18859 108 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 SEC24CP53992 1094 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
ITSN1-201ENST00000379960 MFSD4BQ5TF39 518 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 KIAA0825Q8IV33 1275 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
ITSN1-201ENST00000379960 SH2D3CQ8N5H7 860 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 TSC22D3Q99576 134 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
ITSN1-201ENST00000379960 YIPF2Q9BWQ6 316 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
ITSN1-201ENST00000379960 ITGB4P16144 1822 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 MRC1P22897 1456 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 H7C1W4 665 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 DNM1LO00429 736 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 MYL1P05976 194 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 USP14P54578 494 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 GUCY1A3Q02108 690 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
ITSN1-201ENST00000379960 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
ITSN1-201ENST00000379960 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 RCOR1Q9UKL0 485 aa12.12□□□□□ -0.47
ITSN1-201ENST00000379960 POLD1P28340 1107 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 LSP1P33241 339 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 NLRP12P59046 1061 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 KCTD16Q68DU8 428 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 FMR1NBQ8N0W7 255 aaPredicted RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 NAPGQ99747 312 aaPredicted RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 C15orf41Q9Y2V0 281 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 TPD52L2O43399 206 aaKnown RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 RNF8O76064 485 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 NDUFA8P51970 172 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ZBED6P86452 979 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 TUBB2AQ13885 445 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 TUBB2BQ9BVA1 445 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ACTR5Q9H9F9 607 aaPredicted RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 TUBGCP6Q96RT7 1819 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 GOLGA8KD6RF30 607 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 SMIM24O75264 130 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ANP32DO95626 131 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ATP6V1G2O95670 118 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 MAGEA10P43363 369 aaPredicted RBP12.11□□□□□ -0.47
ITSN1-201ENST00000379960 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
ITSN1-201ENST00000379960 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms