RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ASPRV1Q53RT3 343 aa28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 DTNBO60941 627 aa28.48■■■□□ 2.15
ECHDC3-201ENST00000379215 SMARCA1P28370 1054 aa28.48■■■□□ 2.15
ECHDC3-201ENST00000379215 SEPT2Q15019 361 aa28.48■■■□□ 2.15
ECHDC3-201ENST00000379215 CDC37L1Q7L3B6 337 aa28.48■■■□□ 2.15
ECHDC3-201ENST00000379215 ZSCAN16Q9H4T2 348 aaPredicted RBP28.48■■■□□ 2.15
ECHDC3-201ENST00000379215 MAD2L2Q9UI95 211 aa28.48■■■□□ 2.15
ECHDC3-201ENST00000379215 PALM3A6NDB9 673 aaPredicted RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 PLEKHA8P1O95397 391 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 PTMSP20962 102 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 FUT2Q10981 343 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 MIGA2Q7L4E1 593 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 CDAN1Q8IWY9 1227 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 FBXO18Q8NFZ0 1043 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 ZBTB21Q9ULJ3 1066 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 DDX11L8A8MPP1 907 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 BAG4O95429 457 aaKnown RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 ASNSP08243 561 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 SNHG28P0DPA3 235 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 EEF2P13639 858 aaKnown RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 XBP1P17861 261 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 CAP2P40123 477 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 ATP2B2Q01814 1243 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 FOXD4L5Q5VV16 416 aaPredicted RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 LRRC47Q8N1G4 583 aaKnown RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 ZC3H15Q8WU90 426 aaKnown RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 FOXD4L4Q8WXT5 416 aaPredicted RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 DCPSQ96C86 337 aaKnown RBP28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 ARHGEF10LQ9HCE6 1279 aa28.47■■■□□ 2.15
ECHDC3-201ENST00000379215 CNTNAP5Q8WYK1 1306 aa28.46■■■□□ 2.15
ECHDC3-201ENST00000379215 PPFIA3O75145 1194 aa28.46■■■□□ 2.15
ECHDC3-201ENST00000379215 PDHBP11177 359 aa28.46■■■□□ 2.15
ECHDC3-201ENST00000379215 GUCY1A2P33402 732 aa28.46■■■□□ 2.15
ECHDC3-201ENST00000379215 SUPT20HL1Q3ZLR7 823 aa28.45■■■□□ 2.14
ECHDC3-201ENST00000379215 GPATCH4Q5T3I0 446 aaKnown RBP28.45■■■□□ 2.14
ECHDC3-201ENST00000379215 SRBD1Q8N5C6 995 aaKnown RBP28.45■■■□□ 2.14
ECHDC3-201ENST00000379215 ZNF341Q9BYN7 854 aa28.45■■■□□ 2.14
ECHDC3-201ENST00000379215 SH2D4AQ9H788 454 aa28.45■■■□□ 2.14
ECHDC3-201ENST00000379215 MCM4P33991 863 aa28.44■■■□□ 2.14
ECHDC3-201ENST00000379215 EPHX2P34913 555 aa28.44■■■□□ 2.14
ECHDC3-201ENST00000379215 CLEC10AQ8IUN9 316 aa28.44■■■□□ 2.14
ECHDC3-201ENST00000379215 CCDC82Q8N4S0 544 aa28.44■■■□□ 2.14
ECHDC3-201ENST00000379215 GMCL1P1Q8NEA9 526 aa28.44■■■□□ 2.14
ECHDC3-201ENST00000379215 SPZ1Q9BXG8 430 aa28.44■■■□□ 2.14
ECHDC3-201ENST00000379215 RRP1BQ14684 758 aaKnown RBP28.43■■■□□ 2.14
ECHDC3-201ENST00000379215 SULF1Q8IWU6 871 aa28.43■■■□□ 2.14
ECHDC3-201ENST00000379215 CMTR1Q8N1G2 835 aaKnown RBP28.43■■■□□ 2.14
ECHDC3-201ENST00000379215 DCAF4Q8WV16 495 aa28.43■■■□□ 2.14
ECHDC3-201ENST00000379215 KLRF2D3W0D1 207 aa28.43■■■□□ 2.14
ECHDC3-201ENST00000379215 CTNND1O60716 968 aaKnown RBP28.43■■■□□ 2.14
ECHDC3-201ENST00000379215 SCN4AP35499 1836 aa28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 DCAF8L1A6NGE4 600 aa28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 PHF20L1A8MW92 1017 aa28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 NBPF12Q5TAG4 269 aaPredicted RBP28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 SCAF8Q9UPN6 1271 aaKnown RBP28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 MTMR7Q9Y216 660 aa28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 V9GY48 417 aaPredicted RBP28.42■■■□□ 2.14
ECHDC3-201ENST00000379215 USP17L5A8MUK1 530 aa28.41■■■□□ 2.14
ECHDC3-201ENST00000379215 USP17L2Q6R6M4 530 aa28.41■■■□□ 2.14
ECHDC3-201ENST00000379215 PNMA8AQ86V59 439 aaPredicted RBP28.41■■■□□ 2.14
ECHDC3-201ENST00000379215 FAM177A1Q8N128 213 aaPredicted RBP28.41■■■□□ 2.14
ECHDC3-201ENST00000379215 STAG2Q8N3U4 1231 aa28.41■■■□□ 2.14
ECHDC3-201ENST00000379215 ZNF543Q08ER8 600 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 MYH4Q9Y623 1939 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 FOSBP53539 338 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 RESTQ13127 1097 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 SAFBQ15424 915 aaKnown RBP eCLIP28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 SHROOM1Q2M3G4 852 aaPredicted RBP28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 KRT40Q6A162 431 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 SIAH1Q8IUQ4 282 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 GMCL1Q96IK5 515 aa28.4■■■□□ 2.14
ECHDC3-201ENST00000379215 WDR90Q96KV7 1748 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 JAG1P78504 1218 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 PFKFB3Q16875 520 aaPredicted RBP28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 SLFN13Q68D06 897 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 MCTP1Q6DN14 999 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 USP48Q86UV5 1035 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 GOPCQ9HD26 462 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 ZNF112Q9UJU3 913 aa28.39■■■□□ 2.13
ECHDC3-201ENST00000379215 SCG2P13521 617 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 SLC1A4P43007 532 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 PKN1Q16512 942 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 CSPP1Q1MSJ5 1256 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 CCDC96Q2M329 555 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 BRAPQ7Z569 592 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 FERMT3Q86UX7 667 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 TAF1DQ9H5J8 278 aaPredicted RBP28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 TMX2Q9Y320 296 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 SRCAPQ6ZRS2 3230 aa28.38■■■□□ 2.13
ECHDC3-201ENST00000379215 GOLGA8HP0CJ92 632 aa28.37■■■□□ 2.13
ECHDC3-201ENST00000379215 GUCY1B3Q02153 619 aa28.37■■■□□ 2.13
ECHDC3-201ENST00000379215 RRP36Q96EU6 259 aaKnown RBP28.37■■■□□ 2.13
ECHDC3-201ENST00000379215 AIFM3Q96NN9 605 aa28.37■■■□□ 2.13
ECHDC3-201ENST00000379215 F5H6K3 240 aa28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 KLRC3Q07444 240 aa28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 ATL3Q6DD88 541 aa28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 SH3GLB2Q9NR46 395 aa28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 SEC63Q9UGP8 760 aaKnown RBP28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 KRT85P78386 507 aa28.36■■■□□ 2.13
ECHDC3-201ENST00000379215 KRT26Q7Z3Y9 468 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms