RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 UBAC1Q9BSL1 405 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 F5H6K3 240 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 USP14P54578 494 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 KLRC3Q07444 240 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 CRHR2Q13324 411 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 SH3D19Q5HYK7 790 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 TCEANC2Q96MN5 208 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 NYAP2Q9P242 653 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 AGTPBP1Q9UPW5 1226 aa13.81□□□□□ -0.2
DEPDC4-202ENST00000378244 HSPA4P34932 840 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 PROCA1Q8NCQ7 364 aaPredicted RBP13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 ZSCAN10Q96SZ4 725 aaPredicted RBP13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 PHIPQ8WWQ0 1821 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 CENPFP49454 3210 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 TNKSO95271 1327 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 CPA1P15085 419 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 RPAP3Q9H6T3 665 aaPredicted RBP13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 GOPCQ9HD26 462 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
DEPDC4-202ENST00000378244 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 FOXN1O15353 648 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 PEX10O60683 326 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 MCCP23508 829 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 ENAHQ8N8S7 591 aaPredicted RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 NEK1Q96PY6 1258 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 NDUFB10O96000 172 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 JAKMIP1Q96N16 626 aaKnown RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
DEPDC4-202ENST00000378244 CA12O43570 354 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 ANTXR2P58335 489 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 TCP11L1Q9NUJ3 509 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 CPA4Q9UI42 421 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 PRC1O43663 620 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 MCM5P33992 734 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 SLFN13Q68D06 897 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 MKL1Q969V6 931 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 P2RX7Q99572 595 aaKnown RBP13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
DEPDC4-202ENST00000378244 ERICH2A1L162 156 aa13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 FLOT1O75955 427 aa13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 TOP1P11387 765 aaKnown RBP13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 TMEM67Q5HYA8 995 aa13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 KCTD1Q719H9 257 aa13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 LPAR1Q92633 364 aa13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 SLC1A4P43007 532 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 LBX1P52954 281 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 DGKHQ86XP1 1220 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 TTC14Q96N46 770 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 KAT14Q9H8E8 782 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 PTPRFP10586 1907 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 THSD7BQ9C0I4 1608 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 TLR2O60603 784 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 CASTP20810 708 aaKnown RBP13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 OSBPP22059 807 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 IKQ13123 557 aaPredicted RBP13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 KRT32Q14532 448 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 CATSPERGQ6ZRH7 1159 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 ANKRD13CQ8N6S4 541 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
DEPDC4-202ENST00000378244 GOLGA8HP0CJ92 632 aa13.75□□□□□ -0.21
DEPDC4-202ENST00000378244 HOXA7P31268 230 aaPredicted RBP13.75□□□□□ -0.21
DEPDC4-202ENST00000378244 FGD1P98174 961 aa13.75□□□□□ -0.21
DEPDC4-202ENST00000378244 WTAPQ15007 396 aa13.75□□□□□ -0.21
DEPDC4-202ENST00000378244 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
DEPDC4-202ENST00000378244 TSGA10IPQ3SY00 556 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms