RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TXKP42681 527 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 MORC3Q14149 939 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 KCNJ12Q14500 433 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SLAIN2Q9P270 581 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 GNAT2P19087 354 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PDE4DQ08499 809 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CCDC42Q96M95 316 aa16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 GPR101Q96P66 508 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CXCR5P32302 372 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PTPAQ15257 358 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RAD9BQ6WBX8 426 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TXLNBQ8N3L3 684 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 DYNLL2Q96FJ2 89 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TSPYL1Q9H0U9 437 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 FAN1Q9Y2M0 1017 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TADA3O75528 432 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TC2NQ8N9U0 490 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
TNFRSF1B-201ENST00000376259 BMP6P22004 513 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 KIF5BP33176 963 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 DDB1Q16531 1140 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 MAPKAPK5Q8IW41 473 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ENOX1Q8TC92 643 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 AGLP35573 1532 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 FXR1P51114 621 aaKnown RBP eCLIP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CC2D1AQ6P1N0 951 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 REXO1L1PQ8IX06 675 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PHLPP2Q6ZVD8 1323 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SYCP1Q15431 976 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 EARS2Q5JPH6 523 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 HDXQ7Z353 690 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NLRC4Q9NPP4 1024 aa16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SEPT11Q9NVA2 429 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 FBXO2Q9UK22 296 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RIMBP3CA6NJZ7 1639 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RIMBP3BA6NNM3 1639 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RIMBP3Q9UFD9 1639 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 B4DLN1 442 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 IFT81Q8WYA0 676 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CHP1Q99653 195 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 BCCIPQ9P287 314 aaKnown RBP eCLIP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SRPRBQ9Y5M8 271 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 KRT31Q15323 416 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TCERG1LQ5VWI1 586 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ENAHQ8N8S7 591 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 HPS3Q969F9 1004 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NOC4LQ9BVI4 516 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 USP17L8P0C7I0 530 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 LIFRP42702 1097 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PLA2G4AP47712 749 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TNNI2P48788 182 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 COPB1P53618 953 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 FOXP1Q9H334 677 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TUBE1Q9UJT0 475 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RTL9Q8NET4 1388 aa16.17■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ZEB2O60315 1214 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 KIF5AQ12840 1032 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 HLTFQ14527 1009 aaKnown RBP eCLIP16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CYP26C1Q6V0L0 522 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SLC44A5Q8NCS7 719 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 EVX2Q03828 476 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SRGAP1Q7Z6B7 1085 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SLC39A2Q9NP94 309 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CDC23Q9UJX2 597 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 FOXP2O15409 715 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 N4BP1O75113 896 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 PRDX5P30044 214 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TECP42680 631 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 SPAG1Q07617 926 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ZSCAN29Q8IWY8 852 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TGFBRAP1Q8WUH2 860 aa16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 EPN1Q9Y6I3 576 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1B-201ENST00000376259 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 C6orf229H3BNL8 230 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TUBB4AP04350 444 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NOP2P46087 812 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 DIXDC1Q155Q3 683 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 JAKMIP2Q96AA8 810 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 FHOD1Q9Y613 1164 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ADGRG1Q9Y653 693 aa16.15■□□□□ 0.18
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