RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 DESP17661 470 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 CBX1P83916 185 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 TNFAIP1Q13829 316 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 GPR162Q16538 588 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 TBC1D5Q92609 795 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 NAP1L4Q99733 375 aaKnown RBP20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 NPR1P16066 1061 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 PAK1Q13153 545 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 SYT10Q6XYQ8 523 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 SLC44A5Q8NCS7 719 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 GOPCQ9HD26 462 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 SPATA31A1Q5TZJ5 1347 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 ARHGEF35A5YM69 484 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 B4DLN1 442 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 ZBED4O75132 1171 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 DDAH1O94760 285 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 ZNF75DP51815 510 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 PGBD1Q96JS3 809 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 SYNRGQ9UMZ2 1314 aa20.15■□□□□ 0.82
PTPDC1-202ENST00000375360 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.82
PTPDC1-202ENST00000375360 RGS22Q8NE09 1264 aa20.14■□□□□ 0.82
PTPDC1-202ENST00000375360 DNM3Q9UQ16 869 aa20.14■□□□□ 0.82
PTPDC1-202ENST00000375360 CMA1P23946 247 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 KIF5AQ12840 1032 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 TOB2Q14106 344 aaPredicted RBP20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 TPH2Q8IWU9 490 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 BAG1Q99933 345 aaPredicted RBP20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 PCDHA12Q9UN75 941 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 CPVLQ9H3G5 476 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 RNF26Q9BY78 433 aaPredicted RBP20.14■□□□□ 0.81
PTPDC1-202ENST00000375360 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 PAXBP1Q9Y5B6 917 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 JCADQ9P266 1359 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 FAM196BA6NMK8 535 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 PCP11498 1178 aaKnown RBP20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 DPH6Q7L8W6 267 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 NEK8Q86SG6 692 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 USP37Q86T82 979 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 CPDO75976 1380 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 AKR1B15C9JRZ8 316 aaPredicted RBP20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 ZBTB7AO95365 584 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 IFNAR1P17181 557 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 FBXO11Q86XK2 927 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 CERKQ8TCT0 537 aa20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 FAM84BQ96KN1 310 aaPredicted RBP20.13■□□□□ 0.81
PTPDC1-202ENST00000375360 SORBS3O60504 671 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 KIF23Q02241 960 aaPredicted RBP20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 COA7Q96BR5 231 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 PAGR1Q9BTK6 254 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 GBP3Q9H0R5 595 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 RPL13P26373 211 aaKnown RBP20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 GSTTP1A0A1W2PQM5 241 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 FAM170AA1A519 330 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 POLR3GO15318 223 aaPredicted RBP20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 RBM6P78332 1123 aaKnown RBP20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 MASTLQ96GX5 879 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 XPO4Q9C0E2 1151 aaKnown RBP20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 PCDHA5Q9Y5H7 936 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 SLC39A14Q15043 492 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 ZNF569Q5MCW4 686 aa20.12■□□□□ 0.81
PTPDC1-202ENST00000375360 UBXN2AP68543 259 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 CCDC113Q9H0I3 377 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 FLOT1O75955 427 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 CYP4A11Q02928 519 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 EN1Q05925 392 aaPredicted RBP20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 CCDC17Q96LX7 622 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 PIGSQ96S52 555 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 RTEL1Q9NZ71 1219 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 TESPA1A2RU30 521 aaPredicted RBP20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 NMT2O60551 498 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 COBLO75128 1261 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 CTNNA2P26232 953 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 LIFRP42702 1097 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 VPS72Q15906 364 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 LEKR1Q6ZMV7 388 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 TTLL6Q8N841 843 aa20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTPDC1-202ENST00000375360 CETN3O15182 167 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 FMNL1O95466 1100 aaPredicted RBP20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 IRX3P78415 501 aaPredicted RBP20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 NELFBQ8WX92 580 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CCDC172P0C7W6 258 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CDK8P49336 464 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CNGA4Q8IV77 575 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 MYCT1Q8N699 235 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 RDH13Q8NBN7 331 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 LINC00116Q8NCU8 138 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 SYMPKQ92797 1274 aaKnown RBP20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 CAPZA3Q96KX2 299 aa20.1■□□□□ 0.81
PTPDC1-202ENST00000375360 PRIMPOLQ96LW4 560 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms