RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 CLEC10AQ8IUN9 316 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 IFNL3Q8IZI9 196 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 SOCS4Q8WXH5 440 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 USP6NLQ92738 828 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 NUDT12Q9BQG2 462 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
C9orf16-201ENST00000372994 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 VCPKMTQ9H867 229 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 HOXC10Q9NYD6 342 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 RLFQ13129 1914 aa17.96■□□□□ 0.47
C9orf16-201ENST00000372994 MINDY4BA8MYZ0 360 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 HMGCRP04035 888 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 APPP05067 770 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 EEF2P13639 858 aaKnown RBP17.95■□□□□ 0.46
C9orf16-201ENST00000372994 RASA1P20936 1047 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 CCNA1P78396 465 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 MORN1Q5T089 497 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 GPR142Q7Z601 462 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 TICAM2Q86XR7 235 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 CCAR1Q8IX12 1150 aaKnown RBP17.95■□□□□ 0.46
C9orf16-201ENST00000372994 EXOC6Q8TAG9 804 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 EVI5LQ96CN4 794 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 PAK6Q9NQU5 681 aaPredicted RBP17.95■□□□□ 0.46
C9orf16-201ENST00000372994 BTBD7Q9P203 1132 aa17.95■□□□□ 0.46
C9orf16-201ENST00000372994 SGPL1O95470 568 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 IGHDP01880 384 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 CAPN2P17655 700 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 TDO2P48775 406 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 PLEKHH3Q7Z736 793 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 U2AF1L4Q8WU68 220 aaKnown RBP17.94■□□□□ 0.46
C9orf16-201ENST00000372994 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 MKNK2Q9HBH9 465 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 CEP290O15078 2479 aa17.94■□□□□ 0.46
C9orf16-201ENST00000372994 GREB1LQ9C091 1923 aaPredicted RBP17.94■□□□□ 0.46
C9orf16-201ENST00000372994 CYP2B6P20813 491 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 UBE2Q1Q7Z7E8 422 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 TRIB2Q92519 343 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 TANGO6Q9C0B7 1094 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 LNPKQ9C0E8 428 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 ZNF287Q9HBT7 754 aa17.93■□□□□ 0.46
C9orf16-201ENST00000372994 WDR46O15213 610 aaKnown RBP17.92■□□□□ 0.46
C9orf16-201ENST00000372994 DSG3P32926 999 aa17.92■□□□□ 0.46
C9orf16-201ENST00000372994 TRMT44Q8IYL2 757 aaKnown RBP17.92■□□□□ 0.46
C9orf16-201ENST00000372994 MB21D1Q8N884 522 aa17.92■□□□□ 0.46
C9orf16-201ENST00000372994 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
C9orf16-201ENST00000372994 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
C9orf16-201ENST00000372994 FOXP2O15409 715 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 RGS2P41220 211 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 NUCB1Q02818 461 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 STK11IPQ8N1F8 1099 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 DEFB118Q96PH6 123 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 CRISPLD2Q9H0B8 497 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 GOPCQ9HD26 462 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
C9orf16-201ENST00000372994 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 SLC15A5A6NIM6 579 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 FLOT1O75955 427 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 PTPREP23469 700 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 ATP2B2Q01814 1243 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 TRIM32Q13049 653 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 MAP2K5Q13163 448 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 B4GALNT3Q6L9W6 998 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
C9orf16-201ENST00000372994 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.9■□□□□ 0.464e-8■■■□□ 18.5
C9orf16-201ENST00000372994 NAPBQ9H115 298 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 HMX1Q9NP08 348 aaPredicted RBP17.9■□□□□ 0.46
C9orf16-201ENST00000372994 HELLSQ9NRZ9 838 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 ADAMTS5Q9UNA0 930 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 PARP14Q460N5 1801 aa17.9■□□□□ 0.46
C9orf16-201ENST00000372994 TFRCP02786 760 aaKnown RBP17.89■□□□□ 0.45
C9orf16-201ENST00000372994 PDE4BQ07343 736 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 SHCBP1Q8NEM2 672 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 MKL1Q969V6 931 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 APBA2Q99767 749 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 MOV10L1Q9BXT6 1211 aaKnown RBP17.89■□□□□ 0.45
C9orf16-201ENST00000372994 SPATC1LQ9H0A9 340 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 CWC22Q9HCG8 908 aaKnown RBP17.89■□□□□ 0.45
C9orf16-201ENST00000372994 A0A0G2JMZ2 1700 aa17.89■□□□□ 0.45
C9orf16-201ENST00000372994 STRNO43815 780 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 PRDM1O75626 825 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 SLC3A2P08195 630 aaKnown RBP17.88■□□□□ 0.45
C9orf16-201ENST00000372994 HOXC6P09630 235 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 ZKSCAN1P17029 563 aaPredicted RBP17.88■□□□□ 0.45
C9orf16-201ENST00000372994 PPARAQ07869 468 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 GRB14Q14449 540 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 WDR78Q5VTH9 848 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 ATG4CQ96DT6 458 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 IVNS1ABPQ9Y6Y0 642 aa17.88■□□□□ 0.45
C9orf16-201ENST00000372994 F5H6K3 240 aa17.87■□□□□ 0.45
C9orf16-201ENST00000372994 FARP2O94887 1054 aaPredicted RBP17.87■□□□□ 0.45
C9orf16-201ENST00000372994 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
C9orf16-201ENST00000372994 KLRC3Q07444 240 aa17.87■□□□□ 0.45
C9orf16-201ENST00000372994 ALX1Q15699 326 aa17.87■□□□□ 0.45
C9orf16-201ENST00000372994 CCL14Q16627 93 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms