RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SLURP2P0DP57 97 aa30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 KIF23Q02241 960 aaPredicted RBP30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 TNFAIP1Q13829 316 aa30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 RBM26Q5T8P6 1007 aaKnown RBP30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 GPC2Q8N158 579 aa30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 ZNF396Q96N95 335 aaPredicted RBP30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 KANSL2Q9H9L4 492 aa30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.44■■■□□ 2.46
ATPAF1-202ENST00000371937 MBD3O95983 291 aa30.43■■■□□ 2.46
ATPAF1-202ENST00000371937 PARP1P09874 1014 aaKnown RBP30.43■■■□□ 2.46
ATPAF1-202ENST00000371937 TMEM179Q6ZVK1 233 aa30.43■■■□□ 2.46
ATPAF1-202ENST00000371937 H7C1D1 291 aa30.43■■■□□ 2.46
ATPAF1-202ENST00000371937 SAFBQ15424 915 aaKnown RBP eCLIP30.43■■■□□ 2.46
ATPAF1-202ENST00000371937 PKN1Q16512 942 aa30.43■■■□□ 2.46
ATPAF1-202ENST00000371937 MYH6P13533 1939 aa30.42■■■□□ 2.46
ATPAF1-202ENST00000371937 GNL2Q13823 731 aaKnown RBP30.42■■■□□ 2.46
ATPAF1-202ENST00000371937 ABCB5Q2M3G0 1257 aa30.42■■■□□ 2.46
ATPAF1-202ENST00000371937 STAG2Q8N3U4 1231 aa30.42■■■□□ 2.46
ATPAF1-202ENST00000371937 MTMR7Q9Y216 660 aa30.42■■■□□ 2.46
ATPAF1-202ENST00000371937 ELP1O95163 1332 aa30.41■■■□□ 2.46
ATPAF1-202ENST00000371937 TBC1D12O60347 775 aa30.41■■■□□ 2.46
ATPAF1-202ENST00000371937 TMEM39BQ9GZU3 492 aa30.41■■■□□ 2.46
ATPAF1-202ENST00000371937 TFIP11Q9UBB9 837 aaKnown RBP30.41■■■□□ 2.46
ATPAF1-202ENST00000371937 MMP1P03956 469 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 SAMD7Q7Z3H4 446 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 CABP5Q9NP86 173 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 NYAP2Q9P242 653 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 SBF1O95248 1867 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 EGFRP00533 1210 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 SMARCA1P28370 1054 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 KIF4BQ2VIQ3 1234 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 TBC1D10BQ4KMP7 808 aaPredicted RBP30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 SPATA32Q96LK8 384 aa30.4■■■□□ 2.46
ATPAF1-202ENST00000371937 KLRF2D3W0D1 207 aa30.39■■■□□ 2.46
ATPAF1-202ENST00000371937 U2AF2P26368 475 aaKnown RBP eCLIP30.39■■■□□ 2.46
ATPAF1-202ENST00000371937 UBE2HP62256 183 aa30.39■■■□□ 2.46
ATPAF1-202ENST00000371937 LRRC47Q8N1G4 583 aaKnown RBP30.39■■■□□ 2.46
ATPAF1-202ENST00000371937 MKL1Q969V6 931 aa30.39■■■□□ 2.46
ATPAF1-202ENST00000371937 PDHBP11177 359 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 PFKFB3Q16875 520 aaPredicted RBP30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 CLEC10AQ8IUN9 316 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 SCG2P13521 617 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 YBX3P16989 372 aaKnown RBP eCLIP30.38■■■□□ 2.455e-6■■■□□ 19.1
ATPAF1-202ENST00000371937 ATP2B2Q01814 1243 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 ASPRV1Q53RT3 343 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 USP17L2Q6R6M4 530 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 GPT2Q8TD30 523 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 SPZ1Q9BXG8 430 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 GPRC5DQ9NZD1 345 aa30.38■■■□□ 2.45
ATPAF1-202ENST00000371937 MYH15Q9Y2K3 1946 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 hCG_1642624A0A1W2PR95 340 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 USP17L5A8MUK1 530 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 KIF28PB7ZC32 967 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 SNHG28P0DPA3 235 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 RASA3Q14644 834 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 LEO1Q8WVC0 666 aaPredicted RBP30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 PGAP2Q9UHJ9 254 aa30.37■■■□□ 2.45
ATPAF1-202ENST00000371937 GADD45BO75293 160 aaPredicted RBP30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 GDF11O95390 407 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 SEPT2Q15019 361 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 MYSM1Q5VVJ2 828 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 FOXP1Q9H334 677 aaPredicted RBP30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 KCNJ14Q9UNX9 436 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 GOLGA8HP0CJ92 632 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 EEF2P13639 858 aaKnown RBP30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 ICA1Q05084 483 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 RNF181Q9P0P0 153 aa30.36■■■□□ 2.45
ATPAF1-202ENST00000371937 GH2P01242 217 aa30.35■■■□□ 2.45
ATPAF1-202ENST00000371937 DIS3L2Q8IYB7 885 aaKnown RBP30.35■■■□□ 2.45
ATPAF1-202ENST00000371937 VPS54Q9P1Q0 977 aa30.35■■■□□ 2.45
ATPAF1-202ENST00000371937 HACL1Q9UJ83 578 aa30.35■■■□□ 2.45
ATPAF1-202ENST00000371937 MAP3K10Q02779 954 aa30.34■■■□□ 2.45
ATPAF1-202ENST00000371937 PHF20Q9BVI0 1012 aa30.34■■■□□ 2.45
ATPAF1-202ENST00000371937 USP28Q96RU2 1077 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 GZF1Q9H116 711 aaPredicted RBP30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 SH3GLB2Q9NR46 395 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 RCOR1Q9UKL0 485 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 MYH4Q9Y623 1939 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 CYTH3O43739 400 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 GPATCH4Q5T3I0 446 aaKnown RBP30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 NOSTRINQ8IVI9 506 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 BRMS1Q9HCU9 246 aa30.33■■■□□ 2.45
ATPAF1-202ENST00000371937 BTBD18B2RXH4 712 aa30.32■■■□□ 2.44
ATPAF1-202ENST00000371937 SHROOM1Q2M3G4 852 aaPredicted RBP30.32■■■□□ 2.44
ATPAF1-202ENST00000371937 PIBF1Q8WXW3 757 aa30.32■■■□□ 2.44
ATPAF1-202ENST00000371937 RTEL1Q9NZ71 1219 aa30.32■■■□□ 2.44
ATPAF1-202ENST00000371937 SYNPO2Q9UMS6 1093 aa30.32■■■□□ 2.44
ATPAF1-202ENST00000371937 ZNF543Q08ER8 600 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 RRP1BQ14684 758 aaKnown RBP30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 GSE1Q14687 1217 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 RASGRP2Q7LDG7 609 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 CDAN1Q8IWY9 1227 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 FAM177A1Q8N128 213 aaPredicted RBP30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 BAZ2BQ9UIF8 2168 aaKnown RBP30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 GOLGA6L4A6NEF3 574 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 CEBPZQ03701 1054 aaKnown RBP30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 SLC35G1Q2M3R5 365 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 MIGA2Q7L4E1 593 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 SIAH1Q8IUQ4 282 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 RRP36Q96EU6 259 aaKnown RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms