RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 CAPS2Q9BXY5 557 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.03■□□□□ 0.646e-7■■■■□ 20.4
DKC1-201ENST00000369550 TAB2Q9NYJ8 693 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 SPEF2Q9C093 1822 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 PPP1R3GB7ZBB8 358 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 FBXW10Q5XX13 1052 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 CABLES1Q8TDN4 633 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 GSDMAQ96QA5 445 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 HAUS4Q9H6D7 363 aa19.03■□□□□ 0.64
DKC1-201ENST00000369550 SCN11AQ9UI33 1791 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 A0A087X0B3 334 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 USP8P40818 1118 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 SGMS1Q86VZ5 419 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 RPGRIP1Q96KN7 1286 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 INCENPQ9NQS7 918 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 AGPSO00116 658 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 MYBL2P10244 700 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 IFNAR1P17181 557 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 PPFIA1Q13136 1202 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 STAMQ92783 540 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 JAKMIP2Q96AA8 810 aa19.02■□□□□ 0.64
DKC1-201ENST00000369550 WDR17Q8IZU2 1322 aa19.02■□□□□ 0.63
DKC1-201ENST00000369550 MEGF6O75095 1541 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 INPP5BP32019 993 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 CMTR1Q8N1G2 835 aaKnown RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 CCDC85AQ96PX6 553 aaPredicted RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 HINFPQ9BQA5 517 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 EHD4Q9H223 541 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 TFR2Q9UP52 801 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 REXO2Q9Y3B8 237 aaKnown RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 CSB-PGBD3P0DP91 1061 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 HNRNPH1P31943 449 aaKnown RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 COPB1P53618 953 aaKnown RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 UBXN1Q04323 297 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 TSR1Q2NL82 804 aaKnown RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 OXER1Q8TDS5 423 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 TBC1D2BQ9UPU7 963 aa19.01■□□□□ 0.63
DKC1-201ENST00000369550 KDM6AO15550 1401 aaPredicted RBP19.01■□□□□ 0.63
DKC1-201ENST00000369550 PES1O00541 588 aaKnown RBP19■□□□□ 0.63
DKC1-201ENST00000369550 IDH1O75874 414 aaKnown RBP19■□□□□ 0.63
DKC1-201ENST00000369550 PHKG2P15735 406 aa19■□□□□ 0.63
DKC1-201ENST00000369550 GNGT1P63211 74 aa19■□□□□ 0.63
DKC1-201ENST00000369550 SPAG1Q07617 926 aa19■□□□□ 0.63
DKC1-201ENST00000369550 DPYDQ12882 1025 aa19■□□□□ 0.63
DKC1-201ENST00000369550 RRAGBQ5VZM2 374 aa19■□□□□ 0.63
DKC1-201ENST00000369550 CCDC70Q6NSX1 233 aa19■□□□□ 0.63
DKC1-201ENST00000369550 CCNI2Q6ZMN8 369 aaPredicted RBP19■□□□□ 0.63
DKC1-201ENST00000369550 KIAA1328Q86T90 577 aa19■□□□□ 0.63
DKC1-201ENST00000369550 POTEDQ86YR6 584 aa19■□□□□ 0.63
DKC1-201ENST00000369550 SYMPKQ92797 1274 aaKnown RBP19■□□□□ 0.63
DKC1-201ENST00000369550 LIMA1Q9UHB6 759 aaKnown RBP19■□□□□ 0.63
DKC1-201ENST00000369550 MYH8P13535 1937 aa19■□□□□ 0.63
DKC1-201ENST00000369550 MAP2K2P36507 400 aa19■□□□□ 0.63
DKC1-201ENST00000369550 TTC19Q6DKK2 380 aaPredicted RBP19■□□□□ 0.63
DKC1-201ENST00000369550 AATFQ9NY61 560 aaKnown RBP eCLIP19■□□□□ 0.635e-19■■□□□ 12.5
DKC1-201ENST00000369550 TRIM75PA6NK02 468 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 KCNJ18B7U540 433 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 LIFRP42702 1097 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 KCNJ12Q14500 433 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 RTN1Q16799 776 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 ZBTB3Q9H5J0 574 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 JADE2Q9NQC1 790 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 GNL3LQ9NVN8 582 aaKnown RBP18.99■□□□□ 0.63
DKC1-201ENST00000369550 DDX60Q8IY21 1712 aaKnown RBP18.99■□□□□ 0.63
DKC1-201ENST00000369550 EIF3HO15372 352 aaKnown RBP eCLIP18.99■□□□□ 0.63
DKC1-201ENST00000369550 TTF1Q15361 905 aaPredicted RBP18.99■□□□□ 0.63
DKC1-201ENST00000369550 CHRNA2Q15822 529 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 PAPD7Q5XG87 772 aaKnown RBP18.99■□□□□ 0.63
DKC1-201ENST00000369550 TTLL7Q6ZT98 887 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 BRINP3Q76B58 766 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 EHBP1Q8NDI1 1231 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 OR8K1Q8NGG5 319 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 ZSWIM5Q9P217 1185 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
DKC1-201ENST00000369550 ADD2P35612 726 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 SETQ01105 290 aaPredicted RBP18.98■□□□□ 0.63
DKC1-201ENST00000369550 TCP11X2Q5H9J9 407 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 IQCEQ6IPM2 695 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 IFNL2Q8IZJ0 200 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 BLZF1Q9H2G9 400 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 CXorf56Q9H5V9 222 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 LUC7L2Q9Y383 392 aaKnown RBP18.98■□□□□ 0.63
DKC1-201ENST00000369550 SAMM50Q9Y512 469 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 LRRC10BA6NIK2 292 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 ZNF185O15231 689 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 KRT86O43790 486 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 DEXIO95424 95 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 RRP12Q5JTH9 1297 aaKnown RBP18.98■□□□□ 0.63
DKC1-201ENST00000369550 GBP6Q6ZN66 633 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 SND1Q7KZF4 910 aaKnown RBP eCLIP18.98■□□□□ 0.63
DKC1-201ENST00000369550 FAM184BQ9ULE4 1060 aa18.98■□□□□ 0.63
DKC1-201ENST00000369550 H0YHG0 523 aa18.97■□□□□ 0.63
DKC1-201ENST00000369550 C2orf54Q08AI8 447 aa18.97■□□□□ 0.63
DKC1-201ENST00000369550 PAK1Q13153 545 aa18.97■□□□□ 0.63
DKC1-201ENST00000369550 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
DKC1-201ENST00000369550 ANKRD18AQ8IVF6 992 aa18.97■□□□□ 0.63
DKC1-201ENST00000369550 ZKSCAN3Q9BRR0 538 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms