RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 EXOC3O60645 756 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 P4HA1P13674 534 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 POLGP54098 1239 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 EZH2Q15910 746 aaKnown RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 CABP7Q86V35 215 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 RPS6KC1Q96S38 1066 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 STAT2P52630 851 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 GSTA5Q7RTV2 222 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ABCC4O15439 1325 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ALKQ9UM73 1620 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 CETN3O15182 167 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ANO1Q5XXA6 986 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ATL3Q6DD88 541 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 FOXP4Q8IVH2 680 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 SEC62Q99442 399 aaKnown RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 GBP3Q9H0R5 595 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 TRMT1Q9NXH9 659 aaKnown RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ELP1O95163 1332 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 FSD2A1L4K1 749 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ASPRV1Q53RT3 343 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 KRT40Q6A162 431 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 EEPD1Q7L9B9 569 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 AOPEPQ8N6M6 819 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 LMBR1Q8WVP7 490 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 CLTCQ00610 1675 aaKnown RBP12.01□□□□□ -0.49
PTPRK-205ENST00000368213 DDAH1O94760 285 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ANO6Q4KMQ2 910 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 SESTD1Q86VW0 696 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 SLFN12Q8IYM2 578 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 HACL1Q9UJ83 578 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 AKT3Q9Y243 479 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 RNF123Q5XPI4 1314 aa12.01□□□□□ -0.49
PTPRK-205ENST00000368213 ZMYM4Q5VZL5 1548 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 DAPK3O43293 454 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 ASNSP08243 561 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 CD2APQ9Y5K6 639 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 ZHX2Q9Y6X8 837 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 CDK12Q9NYV4 1490 aaPredicted RBP12□□□□□ -0.49
PTPRK-205ENST00000368213 FOSP01100 380 aaPredicted RBP12□□□□□ -0.49
PTPRK-205ENST00000368213 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
PTPRK-205ENST00000368213 CD19P15391 556 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 CACNB3P54284 484 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 ZBED2Q9BTP6 218 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
PTPRK-205ENST00000368213 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 ABL1P00519 1130 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 TNNI1P19237 187 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 BLIDQ8IZY5 108 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 MED10Q9BTT4 135 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 CCND2P30279 289 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 LIG4P49917 911 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 UBXN2AP68543 259 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 CDC37L1Q7L3B6 337 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 DEFB132Q7Z7B7 95 aa12□□□□□ -0.49
PTPRK-205ENST00000368213 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
PTPRK-205ENST00000368213 MECOMQ03112 1051 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 TFDP1Q14186 410 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 MAP9Q49MG5 647 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 RTEL1Q9NZ71 1219 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 CTNND2Q9UQB3 1225 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 ATF7P17544 494 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-205ENST00000368213 SPECC1Q5M775 1068 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 FANCBQ8NB91 859 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 IWS1Q96ST2 819 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 APOL6Q9BWW8 343 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 ABCA9Q8IUA7 1624 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 A0A0D9SFI3 127 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 FGAP02671 866 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 MCM3P25205 808 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 RETREG2Q8NC44 543 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 SELENOOQ9BVL4 669 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 ZNF215Q9UL58 517 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-205ENST00000368213 TULP4Q9NRJ4 1543 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 BARGINQ6ZT62 677 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
PTPRK-205ENST00000368213 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 A0A1B0GVL5 298 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 ZSCAN20P17040 1043 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-205ENST00000368213 RNASELQ05823 741 aaKnown RBP11.99□□□□□ -0.49
PTPRK-205ENST00000368213 CCDC42Q96M95 316 aa11.99□□□□□ -0.49
PTPRK-205ENST00000368213 LRRIQ4A6NIV6 560 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 GAS8O95995 478 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
PTPRK-205ENST00000368213 PCDHA12Q9UN75 941 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 ADCY9O60503 1353 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 H0YCG3 227 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 SLC16A2P36021 539 aa11.98□□□□□ -0.49
PTPRK-205ENST00000368213 DDX12PQ92771 950 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms