RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 ZP2Q05996 745 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 IKZF1Q13422 519 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 COL9A2Q14055 689 aaPredicted RBP3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 LRRFIP1Q32MZ4 808 aaKnown RBP3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 OVOS1Q6IE37 1185 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 TSPYL5Q86VY4 417 aaPredicted RBP3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 KIAA0825Q8IV33 1275 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 ENOX1Q8TC92 643 aaKnown RBP3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 RASGRP4Q8TDF6 673 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 XAGE3Q8WTP9 111 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 TMEM40Q8WWA1 233 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 ATG4CQ96DT6 458 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 CCDC120Q96HB5 630 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 SPON2Q9BUD6 331 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 SP110Q9HB58 689 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 RC3H2Q9HBD1 1191 aaKnown RBP3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 PRR13Q9NZ81 148 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 ZNRF3Q9ULT6 936 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 PCDHB14Q9Y5E9 798 aa3.12□□□□□ -1.91
RNU4-13P-201ENST00000364019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 H3BS24 57 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 RBAK-RBAKDNI3L0D1 243 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 TLR3O15455 904 aaKnown RBP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 IMPDH2P12268 514 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 NME1P15531 152 aaKnown RBP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 GJA8P48165 433 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 RAD51AP2Q09MP3 1159 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 APOBRQ0VD83 1088 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 MLECQ14165 292 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 USP48Q86UV5 1035 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 BAHD1Q8TBE0 780 aaPredicted RBP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 NKD1Q969G9 470 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 RNF34Q969K3 372 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 SPATA32Q96LK8 384 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 TRIT1Q9H3H1 467 aaKnown RBP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 CARS2Q9HA77 564 aaKnown RBP3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 KCNH3Q9ULD8 1083 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 RNF114Q9Y508 228 aa3.11□□□□□ -1.91
RNU4-13P-201ENST00000364019 EIF4G1Q04637 1599 aaKnown RBP3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 UNCXA6NJT0 531 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 CBX7O95931 251 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 HPXP02790 462 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 SOX9P48436 509 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 RNF4P78317 190 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 NR0B2Q15466 257 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 NBPF9Q3BBW0 867 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 SEZ6Q53EL9 994 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 ZNF394Q53GI3 561 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 ARSHQ5FYA8 562 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 NBPF12Q5TAG4 269 aaPredicted RBP3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 CDKAL1Q5VV42 579 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 NLRC3Q7RTR2 1065 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 DAGLBQ8NCG7 672 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 SYTL5Q8TDW5 730 aaPredicted RBP3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 UBE2FQ969M7 185 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 ALPK1Q96QP1 1244 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 KIF2CQ99661 725 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 HDAC8Q9BY41 377 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 GPATCH2Q9NW75 528 aa3.1□□□□□ -1.91
RNU4-13P-201ENST00000364019 SHROOM4Q9ULL8 1493 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 CC2D2AQ9P2K1 1620 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 ZNF503-AS2A6NEH8 195 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 LRRN2O75325 713 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 ACRP10323 421 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 TPP2P29144 1249 aaPredicted RBP3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 AFMP43652 599 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 HDLBPQ00341 1268 aaKnown RBP3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 TEKQ02763 1124 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 OGFOD2Q6N063 350 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 ZSWIM9Q86XI8 627 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 ZNF654Q8IZM8 581 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 BHLHE22Q8NFJ8 381 aaPredicted RBP3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 LINC01599Q8WXQ3 324 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 FAM168AQ92567 244 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 MRRFQ96E11 262 aaKnown RBP3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 TM9SF2Q99805 663 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 G6PC3Q9BUM1 346 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 PRDM7Q9NQW5 492 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 ZSWIM5Q9P217 1185 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 KLHL3Q9UH77 587 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 TMEM59LQ9UK28 342 aa3.09□□□□□ -1.91
RNU4-13P-201ENST00000364019 CECR2Q9BXF3 1484 aa3.09□□□□□ -1.92
RNU4-13P-201ENST00000364019 SHISA3A0PJX4 238 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 WASH4PA8MWX3 477 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 GLI1P08151 1106 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 ZGLP1P0C6A0 271 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 RAG1P15918 1043 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 GBP1P32455 592 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 MESP2Q0VG99 397 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 ANKRD39Q53RE8 183 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 FYB2Q5VWT5 728 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 TMEM192Q8IY95 271 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 PHACTR4Q8IZ21 702 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 ZNF655Q8N720 491 aaPredicted RBP3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 C19orf47Q8N9M1 422 aaKnown RBP3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 LINC00116Q8NCU8 138 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 SMARCC1Q92922 1105 aaPredicted RBP3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 SLC9A7Q96T83 725 aa3.08□□□□□ -1.92
RNU4-13P-201ENST00000364019 TGIF2Q9GZN2 237 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms