RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 ZNF862O60290 1169 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CAPNS1P04632 268 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 APPP05067 770 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 EPHX1P07099 455 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 IGFALSP35858 605 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SMCPP49901 116 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ETF1P62495 437 aaKnown RBP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CTBSQ01459 385 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PTSQ03393 145 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PDE3AQ14432 1141 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PCBP1Q15365 356 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 KIF4BQ2VIQ3 1234 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLC6A19Q695T7 634 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PKN3Q6P5Z2 889 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FOXR1Q6PIV2 292 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 UBE2R2Q712K3 238 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZNF227Q86WZ6 799 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 TMEM192Q8IY95 271 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CRACR2BQ8N4Y2 399 aaPredicted RBP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 MAGEB6Q8N7X4 407 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 BVESQ8NE79 360 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GSTCDQ8NEC7 633 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLC7A14Q8TBB6 771 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLC7A3Q8WY07 619 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 OSBP2Q969R2 916 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PPP1R14AQ96A00 147 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 IL17RAQ96F46 866 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CCDC74BQ96LY2 380 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GBP3Q9H0R5 595 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 IFT22Q9H7X7 185 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 NDOR1Q9UHB4 597 aa4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 TNPO3Q9Y5L0 923 aaKnown RBP4.82□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ADARB2-AS1A8MUL3 147 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 B4E1Z4 1266 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SH3BP5O60239 455 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PPM1BO75688 479 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 TP53P04637 393 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 C6orf222P0C671 652 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 MAOBP27338 520 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 POLR2BP30876 1174 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GBP1P32455 592 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 RING1Q06587 406 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 DHX8Q14562 1220 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZC3H12AQ5D1E8 599 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SYDE2Q5VT97 1194 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GDF6Q6KF10 455 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CXorf57Q6NSI4 855 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLC4A10Q6U841 1118 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 KSR2Q6VAB6 950 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 LHFPL2Q6ZUX7 228 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 BRAPQ7Z569 592 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ADAT2Q7Z6V5 191 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PPFIBP1Q86W92 1011 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 C12orf40Q86WS4 652 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ANKLE2Q86XL3 938 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CNTD1Q8N815 330 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 OR2W6PQ8NHA6 318 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PNISRQ8TF01 805 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PTPRN2Q92932 1015 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GTPBP3Q969Y2 492 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZNF837Q96EG3 531 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 YIPF4Q9BSR8 244 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 NRSN2Q9GZP1 204 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 MTFR1LQ9H019 292 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 KLHL25Q9H0H3 589 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CCDC8Q9H0W5 538 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SLC52A2Q9HAB3 445 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZNF180Q9UJW8 692 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GDF2Q9UK05 429 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 TRHDEQ9UKU6 1024 aa4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 APOBEC2Q9Y235 224 aaKnown RBP4.81□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SYNGAP1Q96PV0 1343 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SPDYE3A6NKU9 549 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 GABRDO14764 452 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FANCGO15287 622 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PPFIA4O75335 1185 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CLEC3AO75596 197 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ABLIM3O94929 683 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FBXO21O94952 628 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ECEL1O95672 775 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 JMJD7P0C870 316 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PYGMP11217 842 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ZSCAN20P17040 1043 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 BPIP17213 487 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 LIG1P18858 919 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 PAX3P23760 479 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ADH7P40394 386 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 SCNN1BP51168 640 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 ERVK-24P63145 666 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 TMPRSS15P98073 1019 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 FAPQ12884 760 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 CFAP100Q494V2 611 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 POMZP3Q6PJE2 187 aa4.8□□□□□ -1.64
RNU6-1249P-201ENST00000363237 DGKHQ86XP1 1220 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms