RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 NECTIN1Q15223 517 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 CEP135Q66GS9 1140 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 CENPHQ9H3R5 247 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 MRVI1Q9Y6F6 885 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 USP32Q8NFA0 1604 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 NEFHP12036 1026 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 SLFNL1Q499Z3 407 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 NEK8Q86SG6 692 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 NEK11Q8NG66 645 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 IFT74Q96LB3 600 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 ZNF830Q96NB3 372 aaPredicted RBP15.57■□□□□ 0.08
CTR9-201ENST00000361367 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
CTR9-201ENST00000361367 RNF26Q9BY78 433 aaPredicted RBP15.57■□□□□ 0.08
CTR9-201ENST00000361367 STAMQ92783 540 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 PNMA2Q9UL42 364 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 DCAF17Q5H9S7 520 aaPredicted RBP15.56■□□□□ 0.08
CTR9-201ENST00000361367 DYMQ7RTS9 669 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 CTNNBL1Q8WYA6 563 aaPredicted RBP15.56■□□□□ 0.08
CTR9-201ENST00000361367 PLA2G12BQ9BX93 195 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 TESPA1A2RU30 521 aaPredicted RBP15.56■□□□□ 0.08
CTR9-201ENST00000361367 HARSP12081 509 aaKnown RBP15.56■□□□□ 0.08
CTR9-201ENST00000361367 PRPF4BQ13523 1007 aaKnown RBP15.56■□□□□ 0.08
CTR9-201ENST00000361367 PRR16Q569H4 304 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 ADALQ6DHV7 355 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 MAEAQ7L5Y9 396 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 FRMD4BQ9Y2L6 1034 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 MROH2AA6NES4 1674 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 ANKRD62A6NC57 917 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 GNPTABQ3T906 1256 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 SYNCQ9H7C4 482 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 CCPG1Q9ULG6 757 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 CTNND2Q9UQB3 1225 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 GINS2Q9Y248 185 aa15.56■□□□□ 0.08
CTR9-201ENST00000361367 RBM10P98175 930 aaKnown RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 FOXP4Q8IVH2 680 aaPredicted RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 MLKLQ8NB16 471 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 EHBP1Q8NDI1 1231 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 DRC1Q96MC2 740 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 LMBRD1Q9NUN5 540 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 NOD1Q9Y239 953 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 RIPOR2Q9Y4F9 1068 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 NEURL4Q96JN8 1562 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 EIF3JO75822 258 aaKnown RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 RAD51AP2Q09MP3 1159 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 PKP1Q13835 747 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 POSTNQ15063 836 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 ANKRD35Q8N283 1001 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 CTNNA2P26232 953 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 CACNB3P54284 484 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 ARHGEF16Q5VV41 709 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 MCF2L2Q86YR7 1114 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 BEGAINQ9BUH8 593 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 SH2B2O14492 632 aaPredicted RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 ECE2O60344 883 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 CRKP46108 304 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 GPSM2P81274 684 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 IFI16Q16666 785 aaKnown RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 AOC3Q16853 763 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 TMED8Q6PL24 325 aaPredicted RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 KCTD1Q719H9 257 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 MIGA2Q7L4E1 593 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 SP8Q8IXZ3 490 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 NSUN7Q8NE18 718 aaKnown RBP15.55■□□□□ 0.08
CTR9-201ENST00000361367 NT5C3AQ9H0P0 336 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 PCDHA12Q9UN75 941 aa15.55■□□□□ 0.08
CTR9-201ENST00000361367 CDK8P49336 464 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 SH3RF3Q8TEJ3 882 aaPredicted RBP15.54■□□□□ 0.08
CTR9-201ENST00000361367 CCDC42Q96M95 316 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 JADE2Q9NQC1 790 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 LUC7L2Q9Y383 392 aaKnown RBP15.54■□□□□ 0.08
CTR9-201ENST00000361367 PPLO60437 1756 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 EPB41P11171 864 aaKnown RBP15.54■□□□□ 0.08
CTR9-201ENST00000361367 FAM193AP78312 1265 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 SF3B3Q15393 1217 aaKnown RBP15.54■□□□□ 0.08
CTR9-201ENST00000361367 FAM84BQ96KN1 310 aaPredicted RBP15.54■□□□□ 0.08
CTR9-201ENST00000361367 LIFRP42702 1097 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 ATG9AQ7Z3C6 839 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 TPH2Q8IWU9 490 aa15.54■□□□□ 0.08
CTR9-201ENST00000361367 SLIT1O75093 1534 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 CETN3O15182 167 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 GBP3Q9H0R5 595 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 MYO3BQ8WXR4 1341 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 FOSP01100 380 aaPredicted RBP15.53■□□□□ 0.08
CTR9-201ENST00000361367 TBC1D8BQ0IIM8 1120 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 CD2BP2O95400 341 aaKnown RBP15.53■□□□□ 0.08
CTR9-201ENST00000361367 OR52Z1P0C646 297 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 BMP3P12645 472 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 SLC16A2P36021 539 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 SEPT7Q16181 437 aaKnown RBP15.53■□□□□ 0.08
CTR9-201ENST00000361367 NOC4LQ9BVI4 516 aaKnown RBP15.53■□□□□ 0.08
CTR9-201ENST00000361367 TTC12Q9H892 705 aaPredicted RBP15.53■□□□□ 0.08
CTR9-201ENST00000361367 CHRNA5P30532 468 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 TECP42680 631 aa15.53■□□□□ 0.08
CTR9-201ENST00000361367 PAK1Q13153 545 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms