RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 ANKRD2Q9GZV1 360 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 SPDYE16A6NNV3 312 aaPredicted RBP17.69■□□□□ 0.42
COL18A1-203ENST00000359759 GOLGA8KD6RF30 607 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 TNNI1P19237 187 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 ITKQ08881 620 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 CYP2J2P51589 502 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 TTC6Q86TZ1 520 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 FAM71BQ8TC56 605 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
COL18A1-203ENST00000359759 KAZNQ674X7 775 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 ANGEL1Q9UNK9 670 aaKnown RBP17.68■□□□□ 0.42
COL18A1-203ENST00000359759 HIP1RO75146 1068 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 JADE1Q6IE81 842 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 TRIM4Q9C037 500 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 VAMP4O75379 141 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 KRT3P12035 628 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 PHLDB3Q6NSJ2 640 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 CDAN1Q8IWY9 1227 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 RIOK1Q9BRS2 568 aaKnown RBP17.68■□□□□ 0.42
COL18A1-203ENST00000359759 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 KIF14Q15058 1648 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 ITGA6P23229 1130 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 KMT5BQ4FZB7 885 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
COL18A1-203ENST00000359759 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 PICK1Q9NRD5 415 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 TMOD4Q9NZQ9 345 aa17.68■□□□□ 0.42
COL18A1-203ENST00000359759 BZW2Q9Y6E2 419 aaKnown RBP17.68■□□□□ 0.42
COL18A1-203ENST00000359759 GPAA1O43292 621 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 GSTA1P08263 222 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 GSTA2P09210 222 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 CCDC93Q567U6 631 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 P3H4Q92791 437 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 MED10Q9BTT4 135 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 HSPA2P54652 639 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 TPH2Q8IWU9 490 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 XAGE2Q96GT9 111 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 UFL1O94874 794 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 ATF7P17544 494 aaPredicted RBP17.67■□□□□ 0.42
COL18A1-203ENST00000359759 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 PRKG1Q13976 671 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 C4orf50Q6ZRC1 276 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 CPXCR1Q8N123 301 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 ARHGEF10LQ9HCE6 1279 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 RTCBQ9Y3I0 505 aaKnown RBP17.67■□□□□ 0.42
COL18A1-203ENST00000359759 BCAP29Q9UHQ4 241 aa17.67■□□□□ 0.42
COL18A1-203ENST00000359759 G2E3Q7L622 706 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 LLPHQ9BRT6 129 aaKnown RBP17.66■□□□□ 0.42
COL18A1-203ENST00000359759 THAP12O43422 761 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 IFRD2Q12894 506 aaPredicted RBP17.66■□□□□ 0.42
COL18A1-203ENST00000359759 PDCD7Q8N8D1 485 aaKnown RBP17.66■□□□□ 0.42
COL18A1-203ENST00000359759 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 POMGNT1Q8WZA1 660 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 ZNF408Q9H9D4 720 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 TAF5LO75529 589 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 SNCBQ16143 134 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
COL18A1-203ENST00000359759 TFCP2L1Q9NZI6 479 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 PTPN22Q9Y2R2 807 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 KCNJ18B7U540 433 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 COBLO75128 1261 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 PHBP35232 272 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 KCNJ12Q14500 433 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 NONOQ15233 471 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL18A1-203ENST00000359759 TCP10Q12799 353 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 KIF22Q14807 665 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 MMEL1Q495T6 779 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
COL18A1-203ENST00000359759 KCTD16Q68DU8 428 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 KRT40Q6A162 431 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL18A1-203ENST00000359759 ADCY1Q08828 1119 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 BCAS4Q8TDM0 211 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
COL18A1-203ENST00000359759 ABL1P00519 1130 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 IRX4P78413 519 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 FAM47AQ5JRC9 791 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 RASIP1Q5U651 963 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 NOP9Q86U38 636 aaKnown RBP17.65■□□□□ 0.42
COL18A1-203ENST00000359759 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 CFBP00751 764 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 NAA35Q5VZE5 725 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 RPAINQ86UA6 219 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 PPP1R12AO14974 1030 aaPredicted RBP17.65■□□□□ 0.42
COL18A1-203ENST00000359759 MORC3Q14149 939 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 FAM102BQ5T8I3 360 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 MAP3K21Q5TCX8 1036 aa17.65■□□□□ 0.42
COL18A1-203ENST00000359759 SH2D4AQ9H788 454 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms