RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 SCP2P22307 547 aa16.51■□□□□ 0.23
TOP3B-201ENST00000357179 MCAMP43121 646 aa16.51■□□□□ 0.23
TOP3B-201ENST00000357179 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
TOP3B-201ENST00000357179 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
TOP3B-201ENST00000357179 TMTC1Q8IUR5 882 aa16.51■□□□□ 0.23
TOP3B-201ENST00000357179 AKAP11Q9UKA4 1901 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 CASP14P31944 242 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 PREPLQ4J6C6 727 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 SPATS2Q86XZ4 545 aaKnown RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 PHKBQ93100 1093 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 GDAP1L1Q96MZ0 367 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 MYH8P13535 1937 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 H0YHG0 523 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 FMNL1O95466 1100 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 ERCC5P28715 1186 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 NOSTRINQ8IVI9 506 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 ZNF579Q8NAF0 562 aaKnown RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 RPGRIP1Q96KN7 1286 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 ADD3Q9UEY8 706 aaKnown RBP16.5■□□□□ 0.23
TOP3B-201ENST00000357179 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 LRP6O75581 1613 aa16.5■□□□□ 0.23
TOP3B-201ENST00000357179 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 PPP1R12AO14974 1030 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-201ENST00000357179 GYPCP04921 128 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 PTPREP23469 700 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 PLCD1P51178 756 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 ERVK-24P63145 666 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 SSRP1Q08945 709 aaKnown RBP16.49■□□□□ 0.23
TOP3B-201ENST00000357179 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 PI16Q6UXB8 463 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-201ENST00000357179 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 RABEP2Q9H5N1 569 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 MEFVO15553 781 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-201ENST00000357179 MYBL2P10244 700 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 TRHP20396 242 aaPredicted RBP16.49■□□□□ 0.23
TOP3B-201ENST00000357179 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
TOP3B-201ENST00000357179 KANK3Q6NY19 840 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
TOP3B-201ENST00000357179 A6NNZ2 444 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 B4E1Z4 1266 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 IFNAR1P17181 557 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 SKOR1P84550 965 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 CHRNA2Q15822 529 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 TUBB8Q3ZCM7 444 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
TOP3B-201ENST00000357179 CD248Q9HCU0 757 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 GOLGA8KD6RF30 607 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 PSMD14O00487 310 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 RDXP35241 583 aaKnown RBP16.48■□□□□ 0.23
TOP3B-201ENST00000357179 SAFBQ15424 915 aaKnown RBP eCLIP16.48■□□□□ 0.23
TOP3B-201ENST00000357179 RILPL1Q5EBL4 403 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 FBXO2Q9UK22 296 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-201ENST00000357179 ITIH6Q6UXX5 1313 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 MMP1P03956 469 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 RXRAP19793 462 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 YTHDF3Q7Z739 585 aaKnown RBP16.48■□□□□ 0.23
TOP3B-201ENST00000357179 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
TOP3B-201ENST00000357179 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
TOP3B-201ENST00000357179 DCCP43146 1447 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 WLSQ5T9L3 541 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
TOP3B-201ENST00000357179 AENQ8WTP8 325 aaKnown RBP16.47■□□□□ 0.23
TOP3B-201ENST00000357179 PAGR1Q9BTK6 254 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 VEZTQ9HBM0 779 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 BCCIPQ9P287 314 aaKnown RBP eCLIP16.47■□□□□ 0.23
TOP3B-201ENST00000357179 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 NDUFAB1O14561 156 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 ZMYND10O75800 440 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 LRCH2Q5VUJ6 765 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 SPATA20Q8TB22 786 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 FAM184BQ9ULE4 1060 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
TOP3B-201ENST00000357179 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 SPATA1Q5VX52 437 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 CYP26C1Q6V0L0 522 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 TBC1D22AQ8WUA7 517 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 FAXDC2Q96IV6 333 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 STRBPQ96SI9 672 aaKnown RBP16.46■□□□□ 0.23
TOP3B-201ENST00000357179 MTA3Q9BTC8 594 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 SLC26A6Q9BXS9 759 aa16.46■□□□□ 0.23
TOP3B-201ENST00000357179 PIH1D3Q9NQM4 214 aaKnown RBP16.46■□□□□ 0.23
TOP3B-201ENST00000357179 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms