RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 DLEC1Q9Y238 1755 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 A0A1B0GUL6 1792 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 EFCAB8A8MWE9 144 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 DDAH1O94760 285 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 CASQ1P31415 396 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 MAP3K9P80192 1104 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 CTR9Q6PD62 1173 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 PANX2Q96RD6 677 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 WDR24Q96S15 920 aa20.1■□□□□ 0.81
GYPC-202ENST00000356887 BSDC1Q9NW68 430 aaPredicted RBP20.1■□□□□ 0.81
GYPC-202ENST00000356887 BAZ2AQ9UIF9 1905 aaKnown RBP20.1■□□□□ 0.81
GYPC-202ENST00000356887 TEX33O43247 280 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 GNG11P61952 73 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 SF3B3Q15393 1217 aaKnown RBP20.09■□□□□ 0.81
GYPC-202ENST00000356887 ZNF174Q15697 407 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 C3orf67Q6ZVT6 689 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 FAM177A1Q8N128 213 aaPredicted RBP20.09■□□□□ 0.81
GYPC-202ENST00000356887 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
GYPC-202ENST00000356887 GSDMAQ96QA5 445 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 BRMS1Q9HCU9 246 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 PPP1R3GB7ZBB8 358 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 AKR1B15C9JRZ8 316 aaPredicted RBP20.09■□□□□ 0.81
GYPC-202ENST00000356887 PBX1P40424 430 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 ERFEQ4G0M1 354 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 NOM1Q5C9Z4 860 aaKnown RBP20.09■□□□□ 0.81
GYPC-202ENST00000356887 TTC38Q5R3I4 469 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 CDKAL1Q5VV42 579 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 QTRT2Q9H974 415 aaKnown RBP20.09■□□□□ 0.81
GYPC-202ENST00000356887 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.09■□□□□ 0.81
GYPC-202ENST00000356887 FHOD1Q9Y613 1164 aa20.09■□□□□ 0.81
GYPC-202ENST00000356887 TPM1P09493 284 aa20.08■□□□□ 0.81
GYPC-202ENST00000356887 CASP1P29466 404 aa20.08■□□□□ 0.81
GYPC-202ENST00000356887 ADD3Q9UEY8 706 aaKnown RBP20.08■□□□□ 0.81
GYPC-202ENST00000356887 MINPP1Q9UNW1 487 aa20.08■□□□□ 0.81
GYPC-202ENST00000356887 SYNRGQ9UMZ2 1314 aa20.08■□□□□ 0.8
GYPC-202ENST00000356887 SEMA3EO15041 775 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 ATP2C1P98194 919 aaPredicted RBP20.07■□□□□ 0.8
GYPC-202ENST00000356887 TERF2Q15554 542 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 SRBD1Q8N5C6 995 aaKnown RBP20.07■□□□□ 0.8
GYPC-202ENST00000356887 KIFC2Q96AC6 838 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 TMEM51Q9NW97 253 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 CNTNAP5Q8WYK1 1306 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 USP17L12C9JPN9 530 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 USP17L21D6R901 530 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 ORC4O43929 436 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 STX17P56962 302 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 KLHL10Q6JEL2 608 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 CLEC4GQ6UXB4 293 aa20.07■□□□□ 0.8
GYPC-202ENST00000356887 ZRANB2O95218 330 aaKnown RBP eCLIP20.06■□□□□ 0.8
GYPC-202ENST00000356887 PTGDRQ13258 359 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 FBXO33Q7Z6M2 555 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 ARGLU1Q9NWB6 273 aaPredicted RBP20.06■□□□□ 0.8
GYPC-202ENST00000356887 MRFAP1Q9Y605 127 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 KCNQ2O43526 872 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 SCN7AQ01118 1682 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 RBL2Q08999 1139 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 MTF1Q14872 753 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 CTAGE1Q96RT6 745 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 DESI2Q9BSY9 194 aa20.06■□□□□ 0.8
GYPC-202ENST00000356887 NAA15Q9BXJ9 866 aaKnown RBP20.06■□□□□ 0.8
GYPC-202ENST00000356887 PNMA6AP0CW24 399 aaPredicted RBP20.05■□□□□ 0.8
GYPC-202ENST00000356887 E2F4Q16254 413 aa20.05■□□□□ 0.8
GYPC-202ENST00000356887 ZNF771Q7L3S4 317 aaPredicted RBP20.05■□□□□ 0.8
GYPC-202ENST00000356887 PPFIBP1Q86W92 1011 aa20.05■□□□□ 0.8
GYPC-202ENST00000356887 IGSF22Q8N9C0 903 aa20.05■□□□□ 0.8
GYPC-202ENST00000356887 NSUN4Q96CB9 384 aaKnown RBP20.05■□□□□ 0.8
GYPC-202ENST00000356887 TAF1P21675 1872 aa20.05■□□□□ 0.8
GYPC-202ENST00000356887 ONECUT3O60422 494 aaPredicted RBP20.04■□□□□ 0.8
GYPC-202ENST00000356887 EVX2Q03828 476 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 FAM182BQ5T319 152 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 SMYD4Q8IYR2 804 aaPredicted RBP20.04■□□□□ 0.8
GYPC-202ENST00000356887 MRPL44Q9H9J2 332 aaKnown RBP20.04■□□□□ 0.8
GYPC-202ENST00000356887 XDHP47989 1333 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 SOWAHDA6NJG2 315 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 CCDC175P0C221 793 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 TRAPPC10P48553 1259 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 TMCO3Q6UWJ1 677 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 RAD9BQ6WBX8 426 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
GYPC-202ENST00000356887 CTCFLQ8NI51 663 aaPredicted RBP20.04■□□□□ 0.8
GYPC-202ENST00000356887 NMT2O60551 498 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 SCG2P13521 617 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 MECOMQ03112 1051 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 PPP2R3AQ06190 1150 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 KARSQ15046 597 aaKnown RBP20.03■□□□□ 0.8
GYPC-202ENST00000356887 FILIP1LQ4L180 1135 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 RSRC2Q7L4I2 434 aaKnown RBP20.03■□□□□ 0.8
GYPC-202ENST00000356887 IQUBQ8NA54 791 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 ADGRG1Q9Y653 693 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 BRWD3Q6RI45 1802 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 SBF2Q86WG5 1849 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 IL17AQ16552 155 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 PDXDC2PQ6P474 469 aa20.03■□□□□ 0.8
GYPC-202ENST00000356887 PAXIP1Q6ZW49 1069 aaPredicted RBP20.03■□□□□ 0.8
GYPC-202ENST00000356887 CELF1Q92879 486 aaKnown RBP20.03■□□□□ 0.8
GYPC-202ENST00000356887 DCP1AQ9NPI6 582 aaPredicted RBP20.03■□□□□ 0.8
GYPC-202ENST00000356887 NHSQ6T4R5 1651 aa20.02■□□□□ 0.8
GYPC-202ENST00000356887 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms