RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TTC36A6NLP5 189 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 MGEA5O60502 916 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 PLEKHA4Q9H4M7 779 aa14.02□□□□□ -0.17
SYNCRIP-201ENST00000355238 FLT4P35916 1363 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 CHUKO15111 745 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 PFKFB2O60825 505 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 PLS1Q14651 629 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 LRWD1Q9UFC0 647 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 PPIP5K1Q6PFW1 1433 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 IL9RQ01113 521 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 TAF11Q15544 211 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 CABP7Q86V35 215 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 BBOF1Q8ND07 529 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 LRRC8CQ8TDW0 803 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 PCDHA7Q9UN72 937 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 TRIM37O94972 964 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 KLHL29Q96CT2 875 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 BLZF1Q9H2G9 400 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 KIF1CO43896 1103 aaKnown RBP14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 SKIP12755 728 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 BIRC3Q13489 604 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 HERC4Q5GLZ8 1057 aaPredicted RBP14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 G2E3Q7L622 706 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 EXOC7Q9UPT5 735 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
SYNCRIP-201ENST00000355238 UGGT2Q9NYU1 1516 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 HOXB7P09629 217 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 PHKBQ93100 1093 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 LSM14BQ9BX40 385 aaKnown RBP14□□□□□ -0.17
SYNCRIP-201ENST00000355238 GPAA1O43292 621 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 TXKP42681 527 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 CASP8Q14790 479 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 NONOQ15233 471 aaKnown RBP eCLIP14□□□□□ -0.174e-7■■■■■ 30.9
SYNCRIP-201ENST00000355238 DPH5Q9H2P9 285 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 RIC8AQ9NPQ8 531 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 RNF14Q9UBS8 474 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 DNAJC8O75937 253 aaPredicted RBP14□□□□□ -0.17
SYNCRIP-201ENST00000355238 SNX29Q8TEQ0 813 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 E7EWF7 191 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 STAT1P42224 750 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 PRR16Q569H4 304 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 DPH6Q7L8W6 267 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 CCDC89Q8N998 374 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 TTC16Q8NEE8 873 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 EYA2O00167 538 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 THAP12O43422 761 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 PFDN4Q9NQP4 134 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 TXLNGQ9NUQ3 528 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 TPCN1Q9ULQ1 816 aa14□□□□□ -0.17
SYNCRIP-201ENST00000355238 NDUFA8P51970 172 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 SMTNP53814 917 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 RASA3Q14644 834 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 ST5P78524 1137 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 KRT12Q99456 494 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 DBNDD2Q9BQY9 259 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 NOSTRINQ8IVI9 506 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 U2AF1L4Q8WU68 220 aaKnown RBP13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 TUBB6Q9BUF5 446 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 SPZ1Q9BXG8 430 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 GIPC1O14908 333 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 BUB1O43683 1085 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 PALM2Q8IXS6 379 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 RAD51AP2Q09MP3 1159 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 ABCC4O15439 1325 aa13.99□□□□□ -0.17
SYNCRIP-201ENST00000355238 NBPF9Q3BBW0 867 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 SAAL1Q96ER3 474 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 RTEL1Q9NZ71 1219 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 NOP53Q9NZM5 478 aaKnown RBP13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 NNTQ13423 1086 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 EIF3CLB5ME19 914 aaKnown RBP13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 CUL4AQ13619 759 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 ZNF804AQ7Z570 1209 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 EIF3CQ99613 913 aaKnown RBP13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 PLB1Q6P1J6 1458 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 PASKQ96RG2 1323 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 ADCY8P40145 1251 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 COPB1P53618 953 aaKnown RBP13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 ADAM21Q9UKJ8 722 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 KCNJ14Q9UNX9 436 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 CASP14P31944 242 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 POLE2P56282 527 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 SLC39A6Q13433 755 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 DCUN1D2Q6PH85 259 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 LZTS2Q9BRK4 669 aa13.98□□□□□ -0.17
SYNCRIP-201ENST00000355238 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms